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View Structure Prediction Details

Protein: YJR020W
Organism: Saccharomyces cerevisiae
Length: 110 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YJR020W.

Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLPFLRFC TWYVILVRGS PPLMKYECSD VGKKFNGTVC NDASSDCDTS VPPKVPLDPT  60
   61 GAAGRYFVTK LVGERGTSSN IFSRLDMAIL EALIFMQSCL ILSCSWWILN 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.739 a.7.1 Spectrin repeat
View Download 0.694 a.39.2 Insect pheromon/odorant-binding proteins
View Download 0.693 a.7.1 Spectrin repeat
View Download 0.693 a.7.1 Spectrin repeat
View Download 0.691 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.657 a.39.2 Insect pheromon/odorant-binding proteins
View Download 0.657 a.39.2 Insect pheromon/odorant-binding proteins
View Download 0.584 a.77.1 DEATH domain
View Download 0.459 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.458 a.7.1 Spectrin repeat


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle