| Protein: | CBP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 654 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBP1.
| Description | E-value | Query Range |
Subject Range |
|
|
224.0 | [0..56] | [614..46] |
|
|
143.0 | [0..589] | [654..1] |
|
Region A: Residues: [1-557] |
1 11 21 31 41 51
| | | | | |
1 MFLPRLVRYR TERFIKMVPT RTLRRINHSS RDPIQKQVLA LIKANANLND NDKLKIRKYW 60
61 SDMADYKSLR KQENSLLESS ILHEVKIEDF ISFINRTKTS SMTTRGIYRR ECLYQCKKNL 120
121 DLVNQVVSQV SSVRHQKPLT TQLDTMRWCV DDAIGTGDIV MAADLFLLYY RLFTDDKKLD 180
181 EQYAKKIISV LAYPNPLHDH VHLVKYLQLN SLFESITGGG IKLTRFQLET LSNKALGLSN 240
241 EAPQLCKAIL NKLMNINYSL TNDLKLRDDQ VLLAYKSIDE NYRRGNVASV YSIWNKIKEH 300
301 YVSISAHDSR IIYKVFKICT HNRAYRSICS EMFWQLTPEY YCNNPLILPA IIDFITKQDS 360
361 LTMAKELMQN INRYTLPENH HIVWLNKRCL SSLLRMHLKF NDSNGVDRVL KQITTNFRAL 420
421 SQENYQAIII HLFKTQNLDH IAKAVKLLDT IPPGQAMLAY GSIINEVVDW KLASKVKFTD 480
481 NLMALVNDLL TKAHDFDPDH RNSLWNVVSA LYIKKLCHYK KRDGKFVANA KKDIDLAKLL 540
541 YINAAKRSKT YWTKSNC
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [558-654] |
1 11 21 31 41 51
| | | | | |
1 NPFIASSPCD VKLKVNNQNR FTILRNIALS ALQIGRTDIF LWACAELYQN GMTIEELKLD 60
61 WNFILKHQIR NSEFKTNKEI IQDIKKHGVS AVKRYLR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.827 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
