| Protein: | ATP12 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 325 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP12.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..325] | [1..325] |
|
|
3.0E-81 | [17..320] | [2..270] |
|
|
1.0E-76 | [8..322] | [3..264] |
|
|
2.0E-72 | [41..322] | [36..273] |
|
|
5.0E-68 | [41..322] | [73..316] |
|
|
2.0E-66 | [49..320] | [28..256] |
|
|
2.0E-62 | [50..317] | [31..254] |
|
|
1.0E-60 | [49..312] | [28..246] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MLPSLRKGCF IVNSIRLKLP RFYSLNAQPL GTDNTIENNT PTETNRLSKT SQKFWEKVSL 60
61 NRDVEKGKIA LQLDGRTIKT PLGNGIIVDN AKSLLAYLLK LEWSSLSSLS IKTHSLPLTS 120
121 LVARCIDLQM TNEP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.427 | 0.147 | mitochondrial matrix | a.3.1 | Cytochrome c |
| View | Download | 0.396 | 0.143 | mitochondrial matrix | a.1.1 | Globin-like |
| View | Download | 0.555 | 0.034 | mitochondrial matrix | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.516 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.388 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.368 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.367 | N/A | N/A | b.60.1 | Lipocalins |
| View | Download | 0.362 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.352 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.351 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.325 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.307 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.284 | N/A | N/A | a.126.1 | Serum albumin-like |
| View | Download | 0.279 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.274 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.238 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.234 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.223 | N/A | N/A | c.45.1 | (Phosphotyrosine protein) phosphatases II |
| View | Download | 0.213 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.203 | N/A | N/A | b.60.1 | Lipocalins |
| Term | Confidence | Notes |
| binding | 1.72024350544232 | bayes_pls_golite062009 |
| protein binding | 1.2388395457113 | bayes_pls_golite062009 |
|
Region A: Residues: [135-213] |
1 11 21 31 41 51
| | | | | |
1 GCDPQLVAKI GGNSDVIKNQ LLRYLDTDTL LVFSPMNEFE GRLRNAQNEL YIPIIKGMEE 60
61 FLRNFSSESN IRLQILDAD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.655 | 0.026 | mitochondrial matrix | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.818 | 0.026 | mitochondrial matrix | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.612 | 0.026 | mitochondrial matrix | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.563 | 0.026 | mitochondrial matrix | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
| View | Download | 0.512 | 0.026 | mitochondrial matrix | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.467 | 0.026 | mitochondrial matrix | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.466 | 0.026 | mitochondrial matrix | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.464 | 0.026 | mitochondrial matrix | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.448 | 0.026 | mitochondrial matrix | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.446 | 0.026 | mitochondrial matrix | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.426 | 0.026 | mitochondrial matrix | a.28.1 | ACP-like |
| View | Download | 0.418 | 0.026 | mitochondrial matrix | d.58.17 | Metal-binding domain |
| View | Download | 0.416 | 0.026 | mitochondrial matrix | d.58.48 | MTH1187-like |
| View | Download | 0.414 | 0.026 | mitochondrial matrix | d.58.10 | Acylphosphatase-like |
| View | Download | 0.409 | 0.026 | mitochondrial matrix | a.4.1 | Homeodomain-like |
| View | Download | 0.397 | 0.026 | mitochondrial matrix | d.58.3 | Protease propeptides/inhibitors |
| View | Download | 0.396 | 0.026 | mitochondrial matrix | a.77.1 | DEATH domain |
| View | Download | 0.395 | 0.026 | mitochondrial matrix | a.15.1 | TAF(II)230 TBP-binding fragment |
| View | Download | 0.386 | 0.026 | mitochondrial matrix | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.385 | 0.026 | mitochondrial matrix | a.46.1 | Methionine synthase domain |
| View | Download | 0.385 | 0.026 | mitochondrial matrix | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.384 | 0.026 | mitochondrial matrix | a.60.2 | RuvA domain 2-like |
| View | Download | 0.382 | 0.026 | mitochondrial matrix | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.380 | 0.026 | mitochondrial matrix | d.58.17 | Metal-binding domain |
| View | Download | 0.380 | 0.026 | mitochondrial matrix | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.376 | 0.026 | mitochondrial matrix | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.371 | 0.026 | mitochondrial matrix | d.58.12 | eEF-1beta-like |
| View | Download | 0.369 | 0.026 | mitochondrial matrix | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.364 | 0.026 | mitochondrial matrix | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.362 | 0.026 | mitochondrial matrix | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.354 | 0.026 | mitochondrial matrix | d.58.49 | YajQ-like |
| View | Download | 0.347 | 0.026 | mitochondrial matrix | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.338 | 0.026 | mitochondrial matrix | d.57.1 | DNA damage-inducible protein DinI |
| View | Download | 0.338 | 0.026 | mitochondrial matrix | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.335 | 0.026 | mitochondrial matrix | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.333 | 0.026 | mitochondrial matrix | c.102.1 | Cell-division inhibitor MinC, N-terminal domain |
| View | Download | 0.329 | 0.026 | mitochondrial matrix | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.323 | 0.026 | mitochondrial matrix | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.321 | 0.026 | mitochondrial matrix | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.315 | 0.026 | mitochondrial matrix | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.315 | 0.026 | mitochondrial matrix | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.297 | 0.026 | mitochondrial matrix | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.289 | 0.026 | mitochondrial matrix | a.4.3 | ARID-like |
| View | Download | 0.287 | 0.026 | mitochondrial matrix | d.58.40 | D-ribose-5-phosphate isomerase (RpiA), lid domain |
| View | Download | 0.285 | 0.026 | mitochondrial matrix | a.38.1 | Helix-loop-helix DNA-binding domain |
| View | Download | 0.271 | 0.026 | mitochondrial matrix | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.269 | 0.026 | mitochondrial matrix | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.268 | 0.026 | mitochondrial matrix | a.147.1 | Bcr-Abl oncoprotein oligomerization domain |
| View | Download | 0.267 | 0.026 | mitochondrial matrix | d.40.1 | CI-2 family of serine protease inhibitors |
| View | Download | 0.265 | 0.026 | mitochondrial matrix | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.265 | 0.026 | mitochondrial matrix | d.58.5 | GlnB-like |
| View | Download | 0.259 | 0.026 | mitochondrial matrix | d.58.48 | MTH1187-like |
| View | Download | 0.255 | 0.026 | mitochondrial matrix | a.42.1 | MDM2 |
| View | Download | 0.253 | 0.026 | mitochondrial matrix | a.38.1 | Helix-loop-helix DNA-binding domain |
| View | Download | 0.253 | 0.026 | mitochondrial matrix | d.58.5 | GlnB-like |
| View | Download | 0.249 | 0.026 | mitochondrial matrix | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.246 | 0.026 | mitochondrial matrix | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.243 | 0.026 | mitochondrial matrix | a.22.1 | Histone-fold |
| View | Download | 0.236 | 0.026 | mitochondrial matrix | d.94.1 | HPr-like |
| View | Download | 0.229 | 0.026 | mitochondrial matrix | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.227 | 0.026 | mitochondrial matrix | a.2.7 | tRNA-binding arm |
| View | Download | 0.227 | 0.026 | mitochondrial matrix | a.144.2 | Ribosomal protein L20 |
| View | Download | 0.227 | 0.026 | mitochondrial matrix | d.33.1 | Bacterial protein-export protein SecB |
| View | Download | 0.218 | 0.026 | mitochondrial matrix | d.68.4 | YhbY-like |
| View | Download | 0.215 | 0.026 | mitochondrial matrix | d.68.5 | C-terminal domain of ProRS |
| View | Download | 0.213 | 0.026 | mitochondrial matrix | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.213 | 0.026 | mitochondrial matrix | a.47.2 | t-snare proteins |
| View | Download | 0.210 | 0.026 | mitochondrial matrix | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.209 | 0.026 | mitochondrial matrix | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.208 | 0.026 | mitochondrial matrix | a.22.1 | Histone-fold |
| View | Download | 0.207 | 0.026 | mitochondrial matrix | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.204 | 0.026 | mitochondrial matrix | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.204 | 0.026 | mitochondrial matrix | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.202 | 0.026 | mitochondrial matrix | a.180.1 | N-terminal, cytoplasmic domain of anti-sigmaE factor RseA |
| View | Download | 0.200 | 0.026 | mitochondrial matrix | d.58.43 | Mechanosensitive channel protein MscS (YggB), C-terminal domain |
|
Region A: Residues: [214-325] |
1 11 21 31 41 51
| | | | | |
1 IHGLRGNQQS DIVKNAAKKY MSSLSPWDLA ILEKTVLTTK SFICGVLLLE NKKDTANLIP 60
61 ALKTDMDNIV RAATLETIFQ VEKWGEVEDT HDVDKRDIRR KIHTAAIAAF KQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.457 | 0.022 | mitochondrial matrix | a.74.1 | Cyclin-like |
| View | Download | 0.705 | 0.020 | mitochondrial matrix | a.47.2 | t-snare proteins |
| View | Download | 0.562 | 0.013 | mitochondrial matrix | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.529 | 0.008 | mitochondrial matrix | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.512 | 0.002 | mitochondrial matrix | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.407 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.365 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.341 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.328 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.306 | N/A | N/A | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.299 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.297 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.296 | N/A | N/A | g.36.1 | Ferredoxin thioredoxin reductase (FTR), catalytic beta chain |
| View | Download | 0.296 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.296 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.283 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.280 | N/A | N/A | g.53.1 | TAZ domain |
| View | Download | 0.277 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.273 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.270 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.255 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.255 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.251 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.251 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.251 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.249 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.248 | N/A | N/A | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.248 | N/A | N/A | a.185.1 | Gametocyte protein Pfg27 |
| View | Download | 0.246 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.240 | N/A | N/A | a.59.1 | PAH2 domain |
| View | Download | 0.239 | N/A | N/A | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.239 | N/A | N/A | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.238 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.233 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.233 | N/A | N/A | a.162.1 | Pre-protein croslinking domain of SecA |
| View | Download | 0.226 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.224 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.222 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.222 | N/A | N/A | d.92.2 | beta-N-acetylhexosaminidase-like domain |
| View | Download | 0.221 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.218 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.213 | N/A | N/A | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.213 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.205 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.202 | N/A | N/A | a.24.3 | Cytochromes |
