| Protein: | PFD1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 109 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PFD1.
| Description | E-value | Query Range |
Subject Range |
|
|
1.0E-46 | [1..109] | [1..109] |
|
|
0.005 | [7..107] | [15..116] |
|
|
0.009 | [1..109] | [1..110] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MSQIAQEMTV SLRNARTQLD MVNQQLAYLD RQEKLAELTK KELESYPTDK VWRSCGKSFI 60
61 LQDKSKYVND LSHAETVLLD QRKTLKIKKN YLETTVEKTI DNLKALMKN
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.473 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.765 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.502 | a.24.3 | Cytochromes |
| View | Download | 0.551 | a.47.2 | t-snare proteins |
| View | Download | 0.714 | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.458 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.451 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.428 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.363 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.360 | a.68.1 | Wiscott-Aldrich syndrome protein, WASP, C-terminal domain |
| View | Download | 0.355 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.344 | a.64.1 | Saposin |
| View | Download | 0.331 | a.118.8 | TPR-like |
| View | Download | 0.327 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.297 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.288 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.279 | a.4.1 | Homeodomain-like |
| View | Download | 0.277 | d.224.1 | SufE-like |
| View | Download | 0.277 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.276 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.245 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.243 | a.46.1 | Methionine synthase domain |
| View | Download | 0.240 | a.4.3 | ARID-like |
| View | Download | 0.239 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.238 | a.24.1 | Apolipoprotein |
| View | Download | 0.235 | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.229 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.221 | a.26.1 | 4-helical cytokines |
| View | Download | 0.220 | a.7.7 | BAG domain |
| View | Download | 0.217 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.213 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.209 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.205 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.203 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.201 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.200 | d.192.1 | YlxR-like |
