| Protein: | ATG27 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 196 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG27.
| Description | E-value | Query Range |
Subject Range |
|
|
374.0 | [0..1] | [196..76] |
|
|
182.0 | [0..1] | [196..77] |
|
|
180.0 | [0..1] | [196..76] |
|
|
114.0 | [0..1] | [181..76] |
|
|
101.0 | [0..2] | [196..72] |
|
|
90.0 | [0..2] | [196..77] |
|
|
55.0 | [0..1] | [196..78] |
|
Region A: Residues: [1-196] |
1 11 21 31 41 51
| | | | | |
1 MLCGLTDVIL PGKDAITTQI IDFDKNIGFN VEETESALTL TLKGATWGAN SFDAKLEFQC 60
61 NDNMKQDELT SHTWADKSIQ LTLKGPSGCL KSKDDDKKNG DGDNGKDGDS EGKKPAKKAG 120
121 GTSWFTWLFL YALLFTLIYL MVVSFLNTRG GSFQDFRAEF IQRSTQFLTS LPEFCKEVVS 180
181 RILGRSTAQR GGYSAV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [100-196] |
1 11 21 31 41 51
| | | | | |
1 GDGDNGKDGD SEGKKPAKKA GGTSWFTWLF LYALLFTLIY LMVVSFLNTR GGSFQDFRAE 60
61 FIQRSTQFLT SLPEFCKEVV SRILGRSTAQ RGGYSAV
|
| Detection Method: | |
| Confidence: | 3.619789 |
| Match: | PF09451.1 |
| Description: | No description for PF09451.1 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.820 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.767 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.744 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.726 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.668 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
