| Protein: | HAL5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 855 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAL5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..855] | [1..855] |
|
|
0.0 | [487..855] | [3..289] |
|
|
0.0 | [487..855] | [3..289] |
|
|
0.0 | [493..855] | [10..290] |
|
|
0.0 | [487..855] | [3..289] |
|
|
0.0 | [494..855] | [5..284] |
|
Region A: Residues: [1-464] |
1 11 21 31 41 51
| | | | | |
1 MGDEKLSRHT SLKRARSLSE SIKGLFKPSG ISGSNNAAAP SSRPGQDQAH SHQTARIITS 60
61 NVSSPSISPV HSPVLQAAPK HHKLGVPNIA KLSLSPSREP SLNSENEMFS QESFISEKDE 120
121 DEANLLERED LQNKKEEKAR AKHVRSKEAY VPHHRYTVGS DEVERQPRER LKNFPQNAGS 180
181 SNPANSNANH VLDQENNFSI DAMLDYDEES KLRRRNSLGV RNHSNRTRSR KNSLSTPRSP 240
241 PMKNGNGGMN SNATNNVGNG TGNRIYMRGR NHSDSISASS LPKFQEIECK CILDLGHFKV 300
301 FENGYHEHSL RVLPIITNNK NVDSGDEKDA DASVNSGDDG DNDSEANMHK QKSVFSLSGL 360
361 FKSHKDGNQQ QQQQQQQEEN GEQINLEKAF SIIPSQRFIK SQTLKKSRTS NLKNGNNDEL 420
421 MKNDGKNIPQ IVNPNAAVGV EELKLINALS EKIRKGLKSE NTKG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [465-625] |
1 11 21 31 41 51
| | | | | |
1 NNGEGRSNSN KQEDSDDTEG KAGTTNDDTS HKPCSQKYGK SIGVVGAGAY GVVKICARCK 60
61 TAKDVLPYST YSNGKKLFFA VKELKPKPGD QIDKFCTRLT SEFIIGHSLS HPHFEANAMI 120
121 AGNVSRTTPP KHVFNAPNIL KILDLMEYSN SFVEVMEFCA S
|
| Detection Method: | |
| Confidence: | 247.28043 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [626-855] |
1 11 21 31 41 51
| | | | | |
1 GDLYSLLTRN NISNESNNGS SRLIQTVKEG SGSPLHPLEA DCFMKQLLNG VQYMHDHGIA 60
61 HCDLKPENIL FQPNGLLKIC DFGTSSVFQT AWEKHVHFQS GAMGSEPYVA PEEFIRDAEY 120
121 DPRLVDCWSC GIVYCTMVMG QYLWKIAIPE KDSLFKSFLS EIKDDGQFYL FEELRHVSSE 180
181 LNRLRKIALY RTFQVDPTKR ITIEQLLQSS WMRKTKCCVV YRHLHTKVSK
|
| Detection Method: | |
| Confidence: | 247.28043 |
| Match: | 1a06__ |
| Description: | Calmodulin-dependent protein kinase |
| Matching Structure (courtesy of the PDB): |
|
