Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJL132W.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..750] | [1..750] |
|
|
0.0 | [1..267] | [1..254] |
|
|
0.0 | [1..267] | [1..254] |
|
|
0.0 | [1..267] | [1..254] |
|
Region A: Residues: [1-301] |
1 11 21 31 41 51
| | | | | |
1 MSIISSWLLV SIICLTTSIV TKLQAAGVTT HLFYLTRGAP LSLKENYYPW LKAGSFFPDA 60
61 LYSCAPSNKD WSDFAEFTHW PNFLMIAVSY WQQKYGQNDR LRGTHGSLAL KSFLIGVFTH 120
121 QIVDVSWHSL VTDYRMHGLL RVLSETEFDG DIETAHTFLD VMGEFLTLNN VIRDSNNNEN 180
181 WDFLTRSDWK LPREEDLMEI IRNAGLSKEK LSYAELEFCV KRGMAAAISE GYLFRSQRNQ 240
241 LLTNIYSTSP RANDLILNHW LGGQSNLVAM LQRCVPFFET LFHDENTNEA QAEELRLCAN 300
301 L
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.431 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.402 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.303 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.268 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.240 | N/A | N/A | c.23.5 | Flavoproteins |
|
Region A: Residues: [302-750] |
1 11 21 31 41 51
| | | | | |
1 PPVSQKRINA RPLVSSLKAR KGNSHIVVSP MKSFSDFGTS LTMGKFREDN KDYLAVSAPL 60
61 EDTVGAIYIV PWDILTVARK EDFSILQPIT AMYGSKVGTY KASDVDYLLV SQPGTCTIDF 120
121 YFKGVKILTI KDETTEEAHQ LQFAVTGNFY DDKIPDLVVS SPSYGANETG IATFIPGSSI 180
181 ISYLTNSDKY QVVDISTFKG VINLDGYPMK IPFQHFGATI QISDTTDKQK LIYITCQSLG 240
241 TVFVYSSNDL HDLSIPIYYI TKNGVIPAKD SDHVEWHIIP SKEHGMFGAA IYSWNFEGMS 300
301 FVAVSQPMFD TVFIYIEKSG QIEFFLKLVL KIKTKSDSIP DEFGSSLLFN DEEKKLYVSS 360
361 PGSFDARGSI WKISMDELLK AGNDPKRKTL LINNLRHLML INPDKSSKGV SNFGNSMILG 420
421 PQNHLIVGIP QYGYGNFDHM QLTGRILVL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.353 | a.28.1 | ACP-like |
| View | Download | 0.331 | d.95.2 | Homing endonucleases |
| View | Download | 0.326 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.299 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.292 | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
|
Region A: Residues: [263-750] |
1 11 21 31 41 51
| | | | | |
1 GQSNLVAMLQ RCVPFFETLF HDENTNEAQA EELRLCANLP PVSQKRINAR PLVSSLKARK 60
61 GNSHIVVSPM KSFSDFGTSL TMGKFREDNK DYLAVSAPLE DTVGAIYIVP WDILTVARKE 120
121 DFSILQPITA MYGSKVGTYK ASDVDYLLVS QPGTCTIDFY FKGVKILTIK DETTEEAHQL 180
181 QFAVTGNFYD DKIPDLVVSS PSYGANETGI ATFIPGSSII SYLTNSDKYQ VVDISTFKGV 240
241 INLDGYPMKI PFQHFGATIQ ISDTTDKQKL IYITCQSLGT VFVYSSNDLH DLSIPIYYIT 300
301 KNGVIPAKDS DHVEWHIIPS KEHGMFGAAI YSWNFEGMSF VAVSQPMFDT VFIYIEKSGQ 360
361 IEFFLKLVLK IKTKSDSIPD EFGSSLLFND EEKKLYVSSP GSFDARGSIW KISMDELLKA 420
421 GNDPKRKTLL INNLRHLMLI NPDKSSKGVS NFGNSMILGP QNHLIVGIPQ YGYGNFDHMQ 480
481 LTGRILVL
|
| Detection Method: | |
| Confidence: | 2.0 |
| Match: | 1txvA |
| Description: | Structural basis for allostery in integrins and binding of ligand-mimetic therapeutics to the platelet receptor for fibrinogen |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.904790270725195 | bayes_pls_golite062009 |
| protein binding | 0.53464217876859 | bayes_pls_golite062009 |
