YRC Public Data Repository - Protein Structure Prediction

Protein:	ALB1
Organism:	Saccharomyces cerevisiae
Length:	175 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALB1.

Description	E-value	Query Range	Subject Range
ALB1_CANGA - Ribosome biogenesis protein ALB1 OS=Candida glabrata GN=ALB1 PE=3 SV=1 ALB1_CANGA - Ribosome biogenesis protein ALB1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0...	199.0	[0..1]	[175..1]
ALB1_ASHGO - Ribosome biogenesis protein ALB1 OS=Ashbya gossypii GN=ALB1 PE=3 SV=1 ALB1_ASHGO - Ribosome biogenesis protein ALB1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NR...	159.0	[0..1]	[175..1]
ALB1_KLULA - Ribosome biogenesis protein ALB1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / ... ALB1_KLULA - Ribosome biogenesis protein ALB1 OS=Kluyveromyces lactis GN=ALB1 PE=3 SV=1	139.0	[0..1]	[174..1]
ALB1_DEBHA - Ribosome biogenesis protein ALB1 OS=Debaryomyces hansenii GN=ALB1 PE=3 SV=1 ALB1_DEBHA - Ribosome biogenesis protein ALB1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / ...	75.0	[0..1]	[170..1]
gi\|238883190 - gi\|238883190\|gb\|EEQ46828.1\| conserved hypothetical protein [Candida albicans WO-1] ALB1_CANAL - Ribosome biogenesis protein ALB1 OS=Candida albicans GN=ALB1 PE=3 SV=1 ALB1_CANAL - Ribosome biogenesis protein ALB1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ALB1 PE=3 SV...	65.0	[0..1]	[170..1]

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Predicted Domain #1

Region A:
Residues: [1-175]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSKNSINRP KLTSNLHHKV HSLNKKRAQR ERAGLLKPAR SSVNSKSGEI KSVALDLYFQ  60
   61 NKKNESQNST AVTLQNASSS PASITTRTLS KKRAKKIERN LKYATQRKLL VDASAKLEDE 120
  121 MDIDLDGGKK VKENEKKSSL TLVKEALWSV IDDTASQGLI IENGQGTTLG GPFFP

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	127.39794
Match:	PF09135.2
Description:	No description for PF09135.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits