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View Structure Prediction Details

Protein: YJL120W
Organism: Saccharomyces cerevisiae
Length: 107 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YJL120W.

Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFATQVGEV RSKDTGSYNW FDHFFLCVYL ALGISKWPSC MKLYRVCFIF LFTGGFFLFW  60
   61 LSYNRDHERS SSLRIKKVPI HIQKSDYFPS STWIAVLVFS WRHIFCF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.772 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.772 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.611 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.611 d.58.44 Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains
View Download 0.595 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.595 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.552 a.118.11 Cytochrome c oxidase subunit E
View Download 0.532 d.58.19 Bacterial exopeptidase dimerisation domain
View Download 0.520 a.118.11 Cytochrome c oxidase subunit E
View Download 0.516 a.23.4 Mitochondrial import receptor subunit Tom20


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle