| Protein: | GSM1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 618 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSM1.
| Description | E-value | Query Range |
Subject Range |
|
|
1083.0 | [0..1] | [618..1] |
|
|
329.0 | [0..19] | [614..16] |
|
|
314.0 | [0..174] | [614..52] |
|
|
312.0 | [0..245] | [614..104] |
|
|
305.0 | [0..3] | [614..34] |
|
|
276.0 | [0..267] | [614..266] |
|
|
264.0 | [0..320] | [614..245] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MTKKLPSELK QTRKSIQTAC EFCHTKHIQC DVGRPCQNCL KRNIGKFCRD KKRKSRKRIE 60
61 KHGTQPYLNL GKRLVIHDVP SKTVSPSSVH LQRDFLSSDQ EKPGKTPAHN
|
| Detection Method: |  |
| Confidence: | 8.05 |
| Match: | |
| Description: | No description for 1pyiA was found. |
|
Region A: Residues: [111-163] |
1 11 21 31 41 51
| | | | | |
1 TNIQYTYNIN DNFQSAGSIP RITNFNTNNR QTVLENTSNN ISASQAVHLM NDP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.870 | d.58.17 | Metal-binding domain |
| View | Download | 0.777 | d.58.17 | Metal-binding domain |
| View | Download | 0.773 | g.3.11 | EGF/Laminin |
| View | Download | 0.712 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.710 | b.34.5 | Translation proteins SH3-like domain |
| View | Download | 0.678 | b.34.13 | Chromo domain-like |
| View | Download | 0.659 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.659 | g.18.1 | Complement control module/SCR domain |
| View | Download | 0.628 | d.50.1 | dsRNA-binding domain-like |
|
Region A: Residues: [164-376] |
1 11 21 31 41 51
| | | | | |
1 IIPTVRKSTL NLKSHFLEQH KAMQQPLATN CLVATSNVPV HSGMDDSNKS DDDVDDETNI 60
61 HFDSMWCNDE YMKLKDIVDI STPFLPNNSQ IFSLQESEYP NPSASTRGNS SLHLTNLLNS 120
121 TKSVNDQKDS SIGHSTSTFN TYDEVVSRPF ISLDMLHLNR GANANTHPSH NAKLESECDS 180
181 SSHSDADLEK HDTDFISPSK FRELVKTPQD LYD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [377-618] |
1 11 21 31 41 51
| | | | | |
1 NKCLIKPHNY KLAYTKLLTT LRKKFLEGAE IDKSASVKDE HSTQKHNLRY DLEVIIRSIL 60
61 ERYAPIFISL TSNMIEEDLL LQEVTLQRAL LDLENMAKLV SCTPMCIWRR SGEICFVSNE 120
121 FYSLTGFNKN LLLDRTSFIF EYLDHKSVSN YFQIFNELLA FGYNDINKRK KLLMLNACSS 180
181 TSSKITEGFS FTTDGKAIFT KCNLLLSNGL YLKCACCWTV KRDSFNIPIL VMGQFLPIFE 240
241 MD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
