| Protein: | SAP185 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1058 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAP185.
| Description | E-value | Query Range |
Subject Range |
|
|
874.0 | [0..1] | [853..1] |
|
|
690.0 | [0..130] | [946..1] |
|
|
639.0 | [0..1] | [1048..1] |
|
|
617.0 | [0..130] | [653..1] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MSGSFWKFGQ DFGSQSPLAK LLNRAFIKID DKPTSTEAGK IDSNSTDESL ESNSFKSEDE 60
61 EEEYELPNRE EDYKAYKPNL SLLNDLLDDE ELYTELMCSN FKLLVYLKYP EVLSKLIDYV 120
121 RNST
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.284 | a.118.26 | Description not found. |
| View | Download | 0.243 | a.118.26 | Description not found. |
| View | Download | 0.237 | a.118.26 | Description not found. |
| View | Download | 0.235 | a.118.26 | Description not found. |
| View | Download | 0.232 | a.118.26 | Description not found. |
| View | Download | 0.218 | a.95.1 | Influenza virus matrix protein M1 |
|
Region A: Residues: [125-696] |
1 11 21 31 41 51
| | | | | |
1 ILESNIDRVT SEDRDLVRGE DKDTTEDFEN AKADKKNIDG TFEEKERTRS GEEEELENEE 60
61 NDSASEDTRV TLPHELEEHD DTRRARIAAE ILSADVWPIS SALIENEGLL AKLWSILRLP 120
121 SPLSIEASTY FMKINERLLD MNMDGIIEFI LKKEHIVDDF LAHIDNPPLM DFLLKVISTD 180
181 KPEISNGVIQ LFKKQNLVPK LIHLLDPVFD SCTQSAAGDF LKALVTISGN CPNEITSSIG 240
241 PNELTRQLVS PNMMKQLMDI MLKGGNSLNN GVGIIIELIR KNNSDYDTIQ TNYTTIESHP 300
301 PTDRDPIYLG YLVKMFSEHM ADFNKILTEK KIPLLQTSYG TIEPLGFERF KICELIAELL 360
361 HCSNMTLLNE PSAYDIVRER DAERERIFNS QNYVDSNDRS ELKENEDDNT GDADDEVEDD 420
421 TNQVESANTS IDGEEVIDKL NSLQIETNKV NQNMNNEEQH SLMPDFNNGD FKDEEDENPF 480
481 EPQYSDVILD SSDIEKNFRV SPNVGDQLKI SLQDTRVIDT MLEMFFHFQW NNFLHNVVYD 540
541 VVQQIFNGPL KIGYNRFLLD DLLINIRLTD MI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [697-749] |
1 11 21 31 41 51
| | | | | |
1 INGNNECIEY EKGHDTRLGY MGHLTLIAEE VTKFTAYIEE MNITFENTEV MSS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.452 | a.274.1 | Description not found. |
| View | Download | 0.439 | d.68.7 | R3H domain |
| View | Download | 0.439 | d.68.7 | R3H domain |
| View | Download | 0.329 | a.178.1 | Soluble domain of poliovirus core protein 3a |
| View | Download | 0.322 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.322 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.303 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.300 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.257 | d.52.1 | Alpha-lytic protease prodomain |
| View | Download | 0.243 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [750-1058] |
1 11 21 31 41 51
| | | | | |
1 LFESKWIAYT EDVLEDLKEK YNAILGDIAE EGDMLQDEEE DAVYDKGERT MGTVDDYIND 60
61 IMQMDNVRCQ EEEEDEGEGY VSFDEDEPQE YRNGDSVRSK ESNSSEGKRD QEQLYYEYVN 120
121 EDGTKTRLNF NPDSDATEQV PGEVNRDHKI PLKLKRSFTD ACKSETIPNN TVNAKEESVF 180
181 QFSNELSDGW ESSPSNSIPK RASPSKNGMN SPMFQHQFEL HSPTDEFGGH KDEILSAEGH 240
241 DYDIDEYDEL SDDSDEEYDN CEDEDSLDYA DSAAYALCRS KSKDKISWDE EEQARLMGVV 300
301 KFNSEHYRD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
