| Protein: | ALY2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1046 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALY2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1046] | [1..1046] |
|
|
0.0 | [1..1046] | [1..1046] |
|
|
1.0E-55 | [576..1045] | [516..1010] |
|
Region A: Residues: [1-241] |
1 11 21 31 41 51
| | | | | |
1 MPMDQSISSP LFPMEKDIDI PLDATPLAQS SSLQLFIHLA EPVVFLQGFD PQKTEYPSVV 60
61 LRGCLVVRIL KPTKLKSISL SFKGYSRTEW PEGIPPKRQE FVEIKDIVDH TWALYPPTEQ 120
121 KSKKKMDASA PNESNNAANN FLTKESGASL YRTLSDNETI TSRKNSISGL SSLNLSPLGA 180
181 PGNSSVNVKD RESRQRSRSS SVTSSNGPSR NLSPINLLKR ATSPSVSHHN YKPTTTSIFS 240
241 D
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [242-433] |
1 11 21 31 41 51
| | | | | |
1 LLNNTFTHND AASHHGHHIP TSSNHLAMTS NNFTSGSGGE FFVFQPGDYI YAFEELIPQA 60
61 YPESIKADFG FVEYFLFASI ERPGAFKSNI SARQVVNIVR TQAHNSVEES EPIIISRDWE 120
121 NQLYYDIVIA SKDIILDAFL PITFKFAPLD KVTLHRIRIY VTETMEYYCR EKKVHRMEPT 180
181 KKFLLTEQKG PK
|
| Detection Method: | |
| Confidence: | 10.221849 |
| Match: | 1jsyA_ |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [434-1046] |
1 11 21 31 41 51
| | | | | |
1 LPNLPNDANL SKAKNMGNLL QDPKNGDLVN KEYEYQIFIP SRFNNHQQLH PDTSYENIKA 60
61 NHWIKICLRL SRVVDNKRKH YEISIDSPIH VLHRLCSHAN TLLPSYDGHP ASFPKETDSS 120
121 ISSILESSDD NINLYHNSNI FFPKEVLSSP VLSPNVQPLD ILIPHLPSTS LTRNSRQFNR 180
181 NSKSHPSDNT IFNSAKLKSN IYQPESLQRE LASPQAIPLS PITSPMSNME VPPPDFDFSS 240
241 DFISDAASGT TTTEVSSSES SILPRDPPSY KDTVLHDNNQ KRRPNSKHPT PPSLKASHPN 300
301 KNSDKNSSET LNKKESMSKI EENKHKRETT PKKRENRDVK SLSTPQREES KDSTSTGNQS 360
361 NEKNRKRVLS LSSSLHSSPN NSGFAHSALG NLSNESLRSL NRRESVQDNL PSTIRHDNPF 420
421 FTDLNQVLIE DELKNHDKNE LNRHSTNTSS TPASARSSFD YSGINISKDK LNMEPLLSKT 480
481 ETLTNKVNED SFLRPNDSYV DLLEPSVDTT IDITAPYARN SSAWHPLQND NDNNQFSPLL 540
541 GSNENFLNAA NAQNSAESDH NNDIFTQGSG LTESSKNSDS EERFISRLSS PEKVLINTLD 600
601 NESGLQSINE STL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 0.637053679668866 | bayes_pls_golite062009 |
| protein binding | 0.29496902337062 | bayes_pls_golite062009 |
|
Region A: Residues: [529-616] |
1 11 21 31 41 51
| | | | | |
1 CSHANTLLPS YDGHPASFPK ETDSSISSIL ESSDDNINLY HNSNIFFPKE VLSSPVLSPN 60
61 VQPLDILIPH LPSTSLTRNS RQFNRNSK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [617-867] |
1 11 21 31 41 51
| | | | | |
1 SHPSDNTIFN SAKLKSNIYQ PESLQRELAS PQAIPLSPIT SPMSNMEVPP PDFDFSSDFI 60
61 SDAASGTTTT EVSSSESSIL PRDPPSYKDT VLHDNNQKRR PNSKHPTPPS LKASHPNKNS 120
121 DKNSSETLNK KESMSKIEEN KHKRETTPKK RENRDVKSLS TPQREESKDS TSTGNQSNEK 180
181 NRKRVLSLSS SLHSSPNNSG FAHSALGNLS NESLRSLNRR ESVQDNLPST IRHDNPFFTD 240
241 LNQVLIEDEL K
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [868-1046] |
1 11 21 31 41 51
| | | | | |
1 NHDKNELNRH STNTSSTPAS ARSSFDYSGI NISKDKLNME PLLSKTETLT NKVNEDSFLR 60
61 PNDSYVDLLE PSVDTTIDIT APYARNSSAW HPLQNDNDNN QFSPLLGSNE NFLNAANAQN 120
121 SAESDHNNDI FTQGSGLTES SKNSDSEERF ISRLSSPEKV LINTLDNESG LQSINESTL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
