| Protein: | NET1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1189 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NET1.
| Description | E-value | Query Range |
Subject Range |
|
|
8.0E-98 | [1..1189] | [1..1189] |
|
|
3.0E-50 | [371..1172] | [293..1071] |
|
|
3.0E-50 | [371..1172] | [294..1072] |
|
|
2.0E-48 | [371..1172] | [27..795] |
|
|
2.0E-47 | [708..1183] | [535..1016] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MYKLQVVLVP PSLQATMPIQ FGYGPTIAES SQLLPNRTNM AQSAGDASLQ YANLRSANVS 60
61 FTPSYFNQSR FRKFLLFTKP TNTLLNLSDE IIDKCEKMYP SLQEDIEILS LQDNSGCDLD 120
121 PDFLVKDVFN VNNIVRVILK NEIDLDDSAP VSLYKSVKRS KLNNGSPQSV QPQQQIPSSS 180
181 GVLRIAKKRP PTGTTTTTTI RSATNGSMRV STPLARQIYP PPSSKI
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [227-296] |
1 11 21 31 41 51
| | | | | |
1 VSNNSDDEDE DIGERSFLPP PTQPQSPPIR ISSGIDAGKK IKSSIVEEDI VSRSATVDPD 60
61 KTKQQRLLSG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.210 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.232 | a.23.5 | Hemolysin expression modulating protein HHA |
|
Region A: Residues: [297-657] |
1 11 21 31 41 51
| | | | | |
1 TPIMSTMTPN RVTLTGQRVV SEHAHKNELV FSASASSSSF ANGGTAAVTA QDINRKPPVT 60
61 TPRITSGMLK IPEPRISEIE KELKEGPSSP ASILPAKAAK IPMKKPYLEN GENYESDDSS 120
121 SSENQETPET EPHSKASLQR SQSSIADNNG SPVKNSPLGD AMPHNVHLAE LPKASNTSIT 180
181 KSSNGESWGK QQEHQPPRKS SLETIVEKKS QAEPSGIVEP KRMTNFLDDN QVREKEDTND 240
241 KLLEKEILPT IPHNDQPILA SSDKSNGTLK SLAGKVSSNN NASKEDGTII NGTIEDDGND 300
301 NDEVDTTVRI VPQDSDSSSF PKSDLFKMIE GDDTDLPQWF KGKNSRTSGN SKNSKPYTTV 360
361 L
|
| Detection Method: | |
| Confidence: | 4.154902 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [658-689] |
1 11 21 31 41 51
| | | | | |
1 NKDIDNSKPD PRNILPQRTP RSAAKRAAQL LA
|
|
Region B: Residues: [912-985] |
1 11 21 31 41 51
| | | | | |
1 KEKEDSKSKQ VSQKKLKMTD HLKEGNVQLP KPSANDKLKD LKAKFTNSKT LVPPGIISNE 60
61 KNNSSANDDD SSSS
|
| Detection Method: | |
| Confidence: | 13.65 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [690-762] |
1 11 21 31 41 51
| | | | | |
1 GAKKNEVPQK STEDSSSAAS TDDESESGIE TDFSSDDDFK RKNMSVPNNG PKDISLHSLK 60
61 GSVVPVKDSK IIN
|
| Detection Method: | |
| Confidence: | 13.65 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [763-841] |
1 11 21 31 41 51
| | | | | |
1 KEVDEERNDK RDSQKKSAVS ESSVTNSKIS EQMAKSFYPN SNKKQNEATK VETKPATQAS 60
61 SFPVVGGSPS VATKGTTSF
|
| Detection Method: | |
| Confidence: | 13.65 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [842-911] |
1 11 21 31 41 51
| | | | | |
1 NEEGNRKNVK TKAKNESAQI DRQQKETTSR VADLKSANIG GEDLNKKAEG SKEPEKASAN 60
61 IQDANDKNNS
|
| Detection Method: | |
| Confidence: | 13.65 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [986-1189] |
1 11 21 31 41 51
| | | | | |
1 GSSTEDESSS SSSSSDEETS TSRKARRVVV NTPREPVRSS SKIEAPSPSV NKKINATPDK 60
61 IPVTQLMDMS SPPSVKSKTT SNPSSILHDL PRKVRPSLSS LSDLVSRGIP DVKEKTSKSN 120
121 EKSQTKAPSS SDDESSSDSD SNSSSDSVSD SSSDSKSESD SDDSGDSSDD GKSFISAKSA 180
181 SAALGKKKKP SGGFASLIKD FKKK
|
| Detection Method: | |
| Confidence: | 9.81 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
