| Protein: | NUP82 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 713 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NUP82.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..713] | [1..713] |
|
|
6.0E-4 | [506..706] | [356..547] |
|
|
0.002 | [506..709] | [358..548] |
|
Region A: Residues: [1-200] |
1 11 21 31 41 51
| | | | | |
1 MSQSSRLSAL PIFQASLSAS QSPRYIFSSQ NGTRIVFIQD NIIRWYNVLT DSLYHSLNFS 60
61 RHLVLDDTFH VISSTSGDLL CLFNDNEIFV MEVPWGYSNV EDVSIQDAFQ IFHYSIDEEE 120
121 VGPKSSIKKV LFHPKSYRDS CIVVLKEDDT ITMFDILNSQ EKPIVLNKPN NSFGLDARVN 180
181 DITDLEFSKD GLTLYCLNTT
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [201-474] |
1 11 21 31 41 51
| | | | | |
1 EGGDIFAFYP FLPSVLLLNE KDLNLILNKS LVMYESLDST TDVIVKRNVI KQLQFVSKLH 60
61 ENWNSRFGKV DIQKEYRLAK VQGPFTINPF PGELYDYTAT NIATILIDNG QNEIVCVSFD 120
121 DGSLILLFKD LEMSMSWDVD NYVYNNSLVL IERVKLQREI KSLITLPEQL GKLYVISDNI 180
181 IQQVNFMSWA STLSKCINES DLNPLAGLKF ESKLEDIATI ERIPNLAYIN WNDQSNLALM 240
241 SNKTLTFQNI SSDMKPQSTA AETSISTEKS DTVG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [475-713] |
1 11 21 31 41 51
| | | | | |
1 DGFKMSFTQP INEILILNDN FQKACISPCE RIIPSADRQI PLKNEASENQ LEIFTDISKE 60
61 FLQRIVKAQT LGVSIHNRIH EQQFELTRQL QSTCKIISKD DDLRRKFEAQ NKKWDAQLSR 120
121 QSELMERFSK LSKKLSQIAE SNKFKEKKIS HGEMKWFKEI RNQILQFNSF VHSQKSLQQD 180
181 LSYLKSELTR IEAETIKVDK KSQNEWDELR KMLEIDSKII KECNEELLQV SQEFTTKTQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
