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View Structure Prediction Details

Protein: LOH1
Organism: Saccharomyces cerevisiae
Length: 219 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LOH1.

Description E-value Query
Range
Subject
Range
LOH1_YEAST - Outer spore wall protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LOH1 PE=1 SV=...
LOH1 - Protein of unknown function with proposed roles in maintenance of genome integrity and also in spore...
gi|151945047 - gi|151945047|gb|EDN63298.1| conserved protein [Saccharomyces cerevisiae YJM789]
1.0E-93 [1..219] [1..219]

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Predicted Domain #1
Region A:
Residues: [1-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFQLFIYFY FTIVVIAGTN TIQQFSDAGD RLITSLRNLD NNGTYETLTA EKVPIIEGQI  60
   61 QNISAKYEQH TFILKGLEAV LNYKVKSLDN NERESLEIEY EKVEKALDAA LNVSPFEYIK 120
  121 KFKEVSRGKV VNALENLSRE QNRITINGGR EDEKEKEARE KKKRLDRIKR ILTVSLLELG 180
  181 LAQGVADLCA VAPFACLLGV TVGSIGFIFW LALIYNAIQ

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle