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View Structure Prediction Details

Protein: IRC18
Organism: Saccharomyces cerevisiae
Length: 224 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for IRC18.

Description E-value Query
Range
Subject
Range
IRC18_YEAST - Outer spore wall protein 6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC18 PE=2 SV...
gi|151945048 - gi|151945048|gb|EDN63299.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190409462 - gi|190409462|gb|EDV12727.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
IRC18 - Putative protein of unknown function; expression induced in respiratory-deficient cells and in carbo...
5.0E-97 [1..224] [1..224]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVQMIERIF LIQLCLLTVV LASSRAVVEF ESTGTKLVNS LRVLAAYSQS SVCVDEKISG  60
   61 IERQIEEVKD MYGNHSFILK GLNGILNNKV NMLTREIQME TVGNNTFETE TGKLTKGLNR 120
  121 AVNISPFKYI KKFKTVSTKK FESLLNKYDL VAKKGGELTE EQKKKKEVLS RISRVVAATT 180
  181 IEAGLAQGVV DLCITVTTSL CLVSASIGGV GFLIWLTIIY QALT

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle