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View Structure Prediction Details

Protein: YJL017W
Organism: Saccharomyces cerevisiae
Length: 325 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJL017W.

Description E-value Query
Range
Subject
Range
CAF120 - Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex involved in control...
CA120_YEAST - CCR4-NOT transcriptional complex subunit CAF120 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2...
7.0E-85 [11..295] [36..323]

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Predicted Domain #1
Region A:
Residues: [1-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGILDSLKKP VNIKSSLPKF SRSATSINLS SHPVSSRSFL ELPPELFSIT KPIFKLLQAH  60
   61 ANKIYFQSSD AEAVWNVKDS SGHVFEAESI SLLGSHIIIT NSSVQVADVA IIDSPSNINQ 120
  121 CEISSVGEFL QFNNGQLSIT CNDFGLLEKF KRLCMISIFE FISIYKALTG TVISSYGLRM 180
  181 SDMHIILNSP FNFKDWCEVY LDGQGWVKVW CHIDKVSKTN NSKSSSDNDA KGKYQIRFYR 240
  241 DDKSTSSKNC VFFIPDNEYV QDIFFYNINA AEPSKNMNDF FQGLQMIKLV GNVRFCSDTD 300
  301 FNDVVDSGSI YSSANNGSVT AARQH

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle