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View Structure Prediction Details

Protein: DAL7
Organism: Saccharomyces cerevisiae
Length: 554 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAL7.

Description E-value Query
Range		 Subject
Range
DAL7 - Malate synthase, role in allantoin degradation unknown; expression sensitive to nitrogen catabolite ...
MASZ_YEAST - Malate synthase 2, glyoxysomal OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL7 PE=1...
 0.0 [1..554] [1..554]
MASY_SOYBN - Malate synthase, glyoxysomal (Fragment) OS=Glycine max PE=2 SV=1
 0.0 [10..554] [15..564]
MASY_RICCO - Malate synthase, glyoxysomal OS=Ricinus communis PE=2 SV=1
 0.0 [12..554] [19..567]
MASY_BRANA - Malate synthase, glyoxysomal OS=Brassica napus PE=2 SV=1
 0.0 [8..554] [11..561]
MASY_GOSHI - Malate synthase, glyoxysomal OS=Gossypium hirsutum PE=2 SV=1
 0.0 [12..553] [20..565]
MASY_ARATH - Malate synthase OS=Arabidopsis thaliana GN=MLS PE=1 SV=1
 0.0 [8..554] [11..562]
MASY_CUCSA - Malate synthase, glyoxysomal OS=Cucumis sativus PE=2 SV=2
 0.0 [12..554] [21..568]

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Predicted Domain #1
Region A:
Residues: [1-104] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKISLDNTA LYADIDTTPQ FEPSKTTVAD ILTKDALEFI VLLHRTFNST RKQLLANRSN  60
   61 LQSKLDSGEY RFDFLPETEQ IRNDPTWQGA IPAPGLINRS SEIT

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 9.91
Match: 1d8cA
Description: Malate synthase G
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [105-421] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPPLRNMLVN ALNAEVTTYM TDFEDSSSPT WENMIYGQVN LYDAIRNQID FKTPRKEYRL  60
   61 KDDISRLPTL IVRPRGWHMV EKHLYIDDEP ISASIFDFGL YFYHNAKELV KIGKGPYFYL 120
  121 PKMEHHMEVK LWNDIFCVAQ DFIGMPRGTI RATVLIETLP AAFQMEEIIY QIREHSSGLN 180
  181 CGRWDYIFST IKKLRNLPEH VLPNRDLVTM TSPFMDAYVK RLINTCHRRG VHAMGGMAAQ 240
  241 IPIKDDPKAN EAAMNKVRND KIREMKNGHD GSWVAHPALA PICNEVFSNM GTANQIYFVP 300
  301 DVHVTSSDLL NTKIQDA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 160.24799
Match: 1d8cA_
Description: Malate synthase G
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer 4.27762948199878 bayes_pls_golite062009
transferase activity, transferring acyl groups 2.61158006337608 bayes_pls_golite062009
catalytic activity 1.23634637968745 bayes_pls_golite062009
transferase activity 0.263512092168681 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [422-554] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVTTEGIRVN LDIGLQYMEA WLRGSGCVPI NHLMEDAATA EVSRCQLYQW VKHGVVLSDT  60
   61 GDKVTPELTA KILNEETAKL ASASPLGEKN KFALAAKYFL PEVTGKIFSD FLTTLLYDEI 120
  121 IKPSAKPVDL SKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 160.24799
Match: 1d8cA_
Description: Malate synthase G
Matching Structure (courtesy of the PDB):
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle