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View Structure Prediction Details

Protein: DAL1
Organism: Saccharomyces cerevisiae
Length: 460 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAL1.

Description E-value Query
Range		 Subject
Range
DPYL2_CHICK - Dihydropyrimidinase-related protein 2 OS=Gallus gallus GN=DPYSL2 PE=2 SV=1
 0.0 [3..458] [9..472]
DPYL2_BOVIN - Dihydropyrimidinase-related protein 2 OS=Bos taurus GN=DPYSL2 PE=1 SV=1
 0.0 [3..458] [9..472]
CCDS6051.1_1 - null
DPYL2_PONPY - Dihydropyrimidinase-related protein 2 - Pongo pygmaeus (Orangutan)
DPYL2_PONAB - Dihydropyrimidinase-related protein 2 OS=Pongo abelii GN=DPYSL2 PE=2 SV=1
DPYSL2 - dihydropyrimidinase-like 2
 1.0E-99 [3..458] [9..472]
gi|1518520 - gi|1518520|gb|AAB07042.1| collapsin response mediator protein
 1.0E-99 [3..458] [9..472]
gi|2342488 - gi|2342488|dbj|BAA21887.1| dihydropyrimidinase related protein 1 [Mus musculus]
 2.0E-99 [3..458] [9..472]
ALLB_ECODH - Allantoinase OS=Escherichia coli (strain K12 / DH10B) GN=allB PE=3 SV=1
ALLB_ECOBW - Allantoinase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=allB PE=3 SV=1
ALN_ECOLI - Allantoinase (EC 3.5.2.5) - Escherichia coli
gi|89107380, gi|... - gi|89107380|ref|AP_001160.1| allantoinase [Escherichia coli str. K-12 substr. W3110], gi|85674650|db...
EG13619 - allantoinase / Allantoinase: allantoin for anaerobic nitrogen; tetrameric
EG13619 - allantoinase / Allantoinase: allantoin for anaerobic nitrogen; tetrameric
 3.0E-99 [6..460] [1..453]

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Predicted Domain #1
Region A:
Residues: [1-460] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPINAITSDH VIINGANKPA TIVYSTESGT ILDVLEGSVV MEKTEITKYE IHTLENVSPC  60
   61 TILPGLVDSH VHLNEPGRTS WEGFETGTQA AISGGVTTVV DMPLNAIPPT TNVENFRIKL 120
  121 EAAEGQMWCD VGFWGGLVPH NLPDLIPLVK AGVRGFKGFL LDSGVEEFPP IGKEYIEEAL 180
  181 KVLAEEDTMM MFHAELPKAH EDQQQPEQSH REYSSFLSSR PDSFEIDAIN LILECLRARN 240
  241 GPVPPVHIVH LASMKAIPLI RKARASGLPV TTETCFHYLC IAAEQIPDGA TYFKCCPPIR 300
  301 SESNRQGLWD ALREGVIGSV VSDHSPCTPE LKNLQKGDFF DSWGGIASVG LGLPLMFTQG 360
  361 CSLVDIVTWC CKNTSHQVGL SHQKGTIAPG YDADLVVFDT ASKHKISNSS VYFKNKLTAY 420
  421 NGMTVKGTVL KTILRGQVVY TNANGVSKTP LGQTLLDSRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 435.154902
Match: 1gkrA_
Description: L-hydantoinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
allantoinase activity 2.45571277189844 bayes_pls_golite062009
dihydroorotase activity 2.32070383330692 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 2.20489529944693 bayes_pls_golite062009
hydrolase activity 2.17584977880576 bayes_pls_golite062009
dihydropyrimidinase activity 2.07436350152924 bayes_pls_golite062009
deaminase activity 1.79186203771221 bayes_pls_golite062009
catalytic activity 1.70199291046899 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.60895003474033 bayes_pls_golite062009
adenine deaminase activity 1.00917389012319 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.573107361273483 bayes_pls_golite062009
AMP deaminase activity 0.137175704459036 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle