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View Structure Prediction Details

Protein: MND2
Organism: Saccharomyces cerevisiae
Length: 368 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MND2.

Description E-value Query
Range
Subject
Range
MND2_YEAST - Anaphase-promoting complex subunit MND2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
MND2 - Subunit of the anaphase-promoting complex (APC); necessary for maintaining sister chromatid cohesion...
0.0 [1..368] [1..368]

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Predicted Domain #1
Region A:
Residues: [1-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARALRDISL FNDIRKDQNS AGAKHERYNM RDLRSKKNQH VNGIDDYEDD SLDRFIRRKK  60
   61 SRVVKYIPSL SAYNVFNEFP YYPTSASQLL DGKLDEFLML SEQYKSRLPK IRKLGWNRFK 120
  121 PIGINKTMYE LEMLRSRARA QNAEGNNEED FRQHDSREED PRNNGSIGRV ILPHILQENE 180
  181 EYDTGEGVTG LHSMPNDSMA ILANNSANNS QNEEVSEEDE ISYDYDAEFD HVVDEDDNEE 240
  241 GEVPGEGVEG IEVQRERIVP DDLLMRPTSL SRSLQQFVEE AHHLDRNPYD IDSDNDGEDS 300
  301 KVELDMNPDF EDDVGREHDY NSEYSQEPTS YGGITPDLAS NWRNWTRERI TSLDELMERR 360
  361 ARQQRGQD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle