| Protein: | DAL81 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 970 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAL81.
| Description | E-value | Query Range |
Subject Range |
|
|
724.0 | [0..1] | [970..1] |
|
|
404.0 | [0..72] | [811..8] |
|
|
400.0 | [0..93] | [843..1] |
|
|
399.0 | [0..93] | [843..1] |
|
|
396.0 | [0..104] | [773..23] |
|
|
390.0 | [0..41] | [964..25] |
|
|
372.0 | [0..101] | [842..5] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MDPHQSPADN AASPTKSVKA TTKNSSTNNN VNSNNSNNNS NHDILNFNDN YTTILQHLAN 60
61 DHPNILREKG GSQQQQHQQQ QQQQQQQQQQ QQQQSLDTLL HHYQSLLSKS DNAIAFDDNV 120
121 SNS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.425 | N/A | N/A | a.7.15 | Description not found. |
| View | Download | 0.398 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.284 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.267 | N/A | N/A | c.55.3 | Ribonuclease H-like |
| View | Download | 0.255 | N/A | N/A | c.55.3 | Ribonuclease H-like |
| View | Download | 0.247 | N/A | N/A | d.129.3 | Bet v1-like |
| View | Download | 0.233 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.233 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.216 | N/A | N/A | b.55.1 | PH domain-like |
| View | Download | 0.208 | N/A | N/A | a.4.12 | TrpR-like |
|
Region A: Residues: [124-295] |
1 11 21 31 41 51
| | | | | |
1 ADHNGSNSNN NNNNNDISSP GNLMGSCNQC RLKKTKCNYF PDLGNCLECE TSRTKCTFSI 60
61 APNYLKRTSS GANNNMPTSS NSKRMKNFED YSNRLPSSML YRHQQQQQQQ QQQQRIQYPR 120
121 SSFFVGPASV FDLNLTKHVR LDNVDQIQLS KTLSLRKVSP TAQFILQDDF DT
|
| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 1pyiA |
| Description: | PPR1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [296-488] |
1 11 21 31 41 51
| | | | | |
1 TLHSKQEYEV DLVENLVHPH GHLLVEIFFK LIHPFLPILH ERVFLEKYSR SYRELTAPLL 60
61 ASIYSLALQY WDFHPALLGF PKPDVTAQLN NIALETFYAR VGRPKLSIIQ TGLLILQCRS 120
121 ECHNNWVLCS SVVALAEELG LGVECNDWKL PKWEKDLRKR LAWAVWLMDK WCALNEGRQS 180
181 HLILGRNWMI KLL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.627 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.584 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.535 | N/A | N/A | a.192.1 | Description not found. |
| View | Download | 0.477 | N/A | N/A | a.192.1 | Description not found. |
| View | Download | 0.417 | N/A | N/A | f.1.1 | Colicin |
| View | Download | 0.417 | N/A | N/A | f.1.1 | Colicin |
| View | Download | 0.400 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.327 | N/A | N/A | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.298 | N/A | N/A | c.65.1 | Formyltransferase |
|
Region A: Residues: [489-744] |
1 11 21 31 41 51
| | | | | |
1 NFDDFPLNSP TILNSLQNDQ SGSSPSSSND VKNHQIAFGN LPIFNINPTL EDFKNGTLMF 60
61 QQMVSLSIIL GEIMDTFYTQ GSMTINKSIE QVLKLAKPLQ LKLREWYHSL PKNLSMSYAT 120
121 PQKLNSNSTL TLAYFATEIT LHRKIICALN PQTPKELVQV CRTAARTRLV AAIEFIRDLK 180
181 NEHINAFWYN CSTGNLMLIG TFAALLYVTS ATKEEAMIFR DYVRNYTWVL KIGSKYFDKL 240
241 SNALNNMHLL FAQIPG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [745-970] |
1 11 21 31 41 51
| | | | | |
1 LLTDEPVVVS PNSNINSVNP QRSGVQSQIP IQFNVGSPAM TEQGSPLNQW KNLPQEILQQ 60
61 LNSFPNGTTS TTTPVNPTSR QTQLESQGSP AINSANNNSN NTPLPFAPNK SSKKTSQSSP 120
121 NVTPSHMSRH PPSNTSSPRV NSSTNVNSNT QMNASPLTSI NETRQESGDA ADEKTAGRER 180
181 TANEESSTEL KDDNPNSNQE TSATGNQTIK MNDDKNVTIN TRETPL
|
| Detection Method: | |
| Confidence: | 9.12 |
| Match: | |
| Description: | No description for 1ldvA was found. |
