| Protein: | MET28 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 187 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MET28.
| Description | E-value | Query Range |
Subject Range |
|
|
112.0 | [0..4] | [184..185] |
|
|
108.0 | [0..3] | [174..189] |
|
|
108.0 | [0..9] | [187..196] |
|
|
106.0 | [0..27] | [174..122] |
|
|
105.0 | [0..76] | [170..242] |
|
|
105.0 | [0..3] | [176..324] |
|
|
105.0 | [0..8] | [161..32] |
|
|
105.0 | [0..4] | [171..197] |
|
|
105.0 | [0..8] | [173..189] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MSAKQGWEKK STNIDIASRK GMNVNNLSEH LQNLISSDSE LGSRLLSLLL VSSGNAEELI 60
61 SMINNGQDVS QFKKLREPRK GKVAATTAVV VKE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.616 | a.64.1 | Saposin |
| View | Download | 0.592 | a.64.1 | Saposin |
| View | Download | 0.467 | a.118.1 | ARM repeat |
| View | Download | 0.452 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.452 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.426 | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.422 | a.60.8 | HRDC-like |
| View | Download | 0.384 | a.64.1 | Saposin |
|
Region A: Residues: [94-187] |
1 11 21 31 41 51
| | | | | |
1 EEAPVSTSNE LDKIKQERRR KNTEASQRFR IRKKQKNFEN MNKLQNLNTQ INKLRDRIEQ 60
61 LNKENEFWKA KLNDINEIKS LKLLNDIKRR NMGR
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1hjbA |
| Description: | C/ebp beta |
Matching Structure (courtesy of the PDB): |
|
