| Protein: | DSN1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 576 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DSN1.
| Description | E-value | Query Range |
Subject Range |
|
|
365.0 | [0..19] | [576..2135] |
|
|
297.0 | [0..17] | [574..1080] |
|
|
263.0 | [0..173] | [562..703] |
|
|
261.0 | [0..17] | [574..1133] |
|
|
261.0 | [0..17] | [574..1132] |
|
|
261.0 | [0..17] | [574..888] |
|
|
261.0 | [0..17] | [574..1132] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MSLEPTQTVS GTPPMLHQRT HKQVYPLRME TIPILESDSK ATLQSNEPTQ KDEEETEYFE 60
61 NKQSVSNLSP DLKFKRH
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.875 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.857 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.764 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.739 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.735 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.629 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.607 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.536 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.491 | d.9.2 | Description not found. |
| View | Download | 0.433 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.420 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.355 | d.52.8 | Description not found. |
| View | Download | 0.326 | d.52.5 | Probable GTPase Der, C-terminal domain |
| View | Download | 0.292 | d.45.1 | ClpS-like |
|
Region A: Residues: [78-172] |
1 11 21 31 41 51
| | | | | |
1 KNKHIQGFPT LGERLDNLQD IKKAKRVENF NSSAPIADDN HSGDATANAT ANATANATAN 60
61 VNASAMPAPY MPYYYYYHPM NAPTPAMIPY PGSPM
|
| Detection Method: | |
| Confidence: | 5.522879 |
| Match: | 1mmgA |
| Description: | X-RAY STRUCTURES OF THE MGADP, MGATPGAMMAS, AND MGAMPPNP COMPLEXES OF THE DICTYOSTELIUM DISCOIDEUM MYOSIN MOTOR DOMAIN |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [173-350] |
1 11 21 31 41 51
| | | | | |
1 HSIMPNSSLQ PFYSQPTAAG GPDMTTPQNI SSSQQLLPAP QLFPYGSFHQ QQLQQPHYIQ 60
61 RTRERKKSIG SQRGRRLSML ASQANGGSTI ISPHKDIPEE DFYTVVGNAS FGKNLQIRQL 120
121 FNWCLMRSLH KLELKAKNQE EEGELEHLTK KSKLESTKAE TDYVDPKRLA MVIIKEFV
|
| Detection Method: | |
| Confidence: | 44.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [351-576] |
1 11 21 31 41 51
| | | | | |
1 DDLKKDHIAI DWEDEEKYED EDEEKILDNT ENYDDTELRQ LFQENDDDDD DDDEVDYSEI 60
61 QRSRRKFSER RKALPKEPKK LLPNSKNVEN TKNLSILTSK VNAIKNEVKE WAVTLDTSRP 120
121 DLEWQELTSF SSQPLEPLSD TEEPDLAIAD VETKLETKVD ELRYQSHILN SHSLALNEIT 180
181 NSKVNKLNIE TMRKISSETD DDHSQVINPQ QLLKGLSLSF SKKLDL
|
| Detection Method: | |
| Confidence: | 44.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
| Matching Structure (courtesy of the PDB): |
|
