YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YJL222W-A, YIL174W
Organism: Saccharomyces cerevisiae
Length: 75 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YJL222W-A, YIL174W.

Description E-value Query
Range
Subject
Range
YA067_YEAST - Putative UPF0377 protein YAL067W-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAL06...
YAL067W-A - Putative protein of unknown function; identified by gene-trapping, microarray-based expression analy...
126.0 [0..1] [75..1]

Back

Predicted Domain #1
Region A:
Residues: [1-75]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIIGVPRCL EKPFCAPAKF PFSVKKNIRI LDLDPRTEAY CLSLNSVCSK RLPCKKYFYL  60
   61 LNSYNIKRVL GVVYC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.478 a.6.1 Putative DNA-binding domain
View Download 0.399 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.386 a.6.1 Putative DNA-binding domain
View Download 0.367 d.58.17 Metal-binding domain
View Download 0.364 d.214.1 Hypothetical protein MTH1880


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle