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View Structure Prediction Details

Protein: YIL169C
Organism: Saccharomyces cerevisiae
Length: 995 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIL169C.

Description E-value Query
Range
Subject
Range
SPBPJ4664.02 - glycoprotein
YHU2_SCHPO - Uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 OS=Schizosaccharomyces pombe (str...
349.0 [0..1] [985..1313]
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
339.0 [0..4] [994..451]
gi|3649741 - gi|3649741|emb|CAA03985.1| mucin [Homo sapiens]
311.0 [0..7] [987..45]
gi|33310026 - gi|33310026|gb|AAQ03243.1|AF414112_1 putative cell wall protein FLO11p [Candida albicans]
gi|68482880, gi|... - gi|68482880|ref|XP_714666.1| putative cell wall adhesin [Candida albicans SC5314], gi|46436253|gb|EA...
296.0 [0..4] [972..136]
gi|11263742 - gi|11263742|pir||T39174 hypothetical Serine/threonine repeat containing protein [imported] - fission...
295.0 [0..2] [988..82]
Muc12Ea-PA - The gene Mucin 12Ea is referred to in FlyBase by the symbol Dmel\Muc12Ea (CG32602, FBgn0052602). It ...
290.0 [0..4] [994..1515]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNRLNKFQA ALALALYSQS ALGQYYSNST SISSNSSSTS VVSSSSGSVS ISSSIAETSS  60
   61 SATDILSSIT QSASSTSGVS SSVGPSSSSV VSSSVSQSSS SVSDVSSSVS QSSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [115-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SASDVSSSVS QSASSTSDVS SSVSQSSSSA SDVSSSVSQS SSSASDVSSS VSQSASSASD  60
   61 VSSSVSQSAS STSDVSSSVS QSSSSASDVS SSVSQSSSSA SDVSSSVSQS ASSTSDVSSS 120
  121 VSQSASSTSG VSSSGSQSVS SASGSSSSFP QSTSSASTAS GSAT

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 11.34
Match:
Description: No description for 1qu7A was found.

Predicted Domain #3
Region A:
Residues: [279-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNSLSSITSS ASSASATASN SLSSSDGTIY LPTTTISGDL TLTGKVIATE GVVVAAGAKL  60
   61 TLLDGD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.613 g.18.1 Complement control module/SCR domain
View Download 0.613 g.18.1 Complement control module/SCR domain
View Download 0.556 g.18.1 Complement control module/SCR domain
View Download 0.550 d.17.1 Cystatin/monellin
View Download 0.546 d.17.1 Cystatin/monellin
View Download 0.450 d.24.1 Pili subunits
View Download 0.444 d.58.1 4Fe-4S ferredoxins
View Download 0.415 g.41.3 Zinc beta-ribbon
View Download 0.402 d.58.49 YajQ-like

Predicted Domain #4
Region A:
Residues: [345-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KYSFSADLKV YGDLLVKKSK ETYPGTEFDI SGENFDVTGN FNAEESAATS ASIYSFTPSS  60
   61 FDNSGDISLS LSKSKKGEVT FSPYSNSGAF SFSNAILNGG SVSGLQRRDD TEGSVNNGEI 120
  121 N

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 9.34
Match:
Description: No description for 1deqA was found.

Predicted Domain #5
Region A:
Residues: [466-737]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDNGSTYVIV EPVSGKGTVN IISGNLYLHY PDTFTGQTVV FKGEGVLAVD PTETNATPIP  60
   61 VVGYTGKNQI AITADITALS YDGTTGVLTA TQGNRQFSFA IGTGFSSSDF SVSEGIFAGA 120
  121 YAYYLNYNGV VATSAASSST ASGASASVTG STSFGASVTG STASTSFGAS VTGSTASTSF 180
  181 GASVTGSTSV YTTTLDYVNA TSTVVVSCSE TTDSNGNVYT ITTTVPCSST TATITSCDET 240
  241 GCHVSTSTGA VVTETVSSKS YTTATVTHCD DN

[Run NCBI BLAST on this sequence.]

Detection Method: ab initio
Confidence: 14.68
Match:
Description: No description for 1ldvA was found.

Predicted Domain #6
Region A:
Residues: [738-995]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GCNTKTVTSE CSKETSATTA SPKSYTTVTV THCDDNGCNT KTVTSEAPEA TTTTTVSSQS  60
   61 YTTATVTHCD DNGCKTKTVT SEAPEATTTT VSPKTYTTAT VTQCDDNGCS TKTVTSECPE 120
  121 ETSATTTSPK SYTTVTVTHC DDNGCNTKTV TSEAPEATTT TVSPKTYTTA TVTQCDDNGC 180
  181 STKTVTSEAP KETSETSETS AAPKDIHYCH WLLNGDDNGC NVKIITSKIP EATSTVTQLV 240
  241 LLQSHTLLSL LRVLKQPH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle