| Protein: | TID3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 691 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TID3.
| Description | E-value | Query Range |
Subject Range |
|
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3.0E-95 | [1..690] | [1120..1843] |
|
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4.0E-94 | [1..690] | [1123..1846] |
|
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5.0E-94 | [1..690] | [137..860] |
|
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7.0E-94 | [1..690] | [1121..1844] |
|
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8.0E-94 | [1..690] | [1122..1845] |
|
Region A: Residues: [1-181] |
1 11 21 31 41 51
| | | | | |
1 MQSSTSTDQH VLHHMDPHRF TSQIPTATSS QLRRRNSTNQ GLTDMINKSI ARNTISGTGI 60
61 PTGGINKNKR TRSTVAGGTN GTALALNDKS NSRNSVSRLS INQLGSLQQH LSNRDPRPLR 120
121 DKNFQSAIQE EIYDYLKKNK FDIETNHPIS IKFLKQPTQK GFIIIFKWLY LRLDPGYGFT 180
181 K
|
| Detection Method: |  |
| Confidence: | 46.431798 |
| Match: | PF03801 |
| Description: | HEC/Ndc80p family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [182-498] |
1 11 21 31 41 51
| | | | | |
1 SIENEIYQIL KNLRYPFLES INKSQISAVG GSNWHKFLGM LHWMVRTNIK LDMCLNKVDR 60
61 SLINQNTQEI TILSQPLKTL DEQDQRQERY ELMVEKLLID YFTESYKSFL KLEDNYEPSM 120
121 QELKLGFEKF VHIINTDIAN LQTQNDNLYE KYQEVMKISQ KIKTTREKWK ALKSDSNKYE 180
181 NYVNAMKQKS QEWPGKLEKM KSECELKEEE IKALQSNISE LHKILRKKGI STEQFELQNQ 240
241 EREKLTRELD KINIQSDKLT SSIKSRKLEA EGIFKSLLDT LRQYDSSIQN LTRSRSQLGH 300
301 NVNDSSLKIN ISENLLD
|
| Detection Method: | |
| Confidence: | 37.9794 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [499-585] |
1 11 21 31 41 51
| | | | | |
1 RDFHEGISYE QLFPKGSGIN ESIKKSILKL NDEIQERIKT IEKDNITLEK DIKNLKHDIN 60
61 EKTQINEKLE LELSEANSKF ELSKQEN
|
| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
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Region A: Residues: [586-691] |
1 11 21 31 41 51
| | | | | |
1 ERLLVAQRIE IEKMEKKIND SNLLMKTKIS DAEELVTSTE LKLEELKVDL NRKRYKLHQQ 60
61 VIHVIDITSK FKINIQSSLE NSENELGNVI EELRNLEFET EHNVTN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.661 | 0.554 | chromosome segregation | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.784 | 0.051 | microtubule nucleation | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.851 | 0.012 | microtubule nucleation | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.696 | 0.006 | microtubule nucleation | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.681 | 0.003 | microtubule nucleation | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.657 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.619 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.548 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.538 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.527 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.522 | N/A | N/A | d.212.1 | TolA/TonB C-terminal domain |
| View | Download | 0.511 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.463 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.461 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.461 | N/A | N/A | a.24.11 | Bacterial GAP domain |
| View | Download | 0.448 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.447 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.442 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.441 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.434 | N/A | N/A | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.432 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.426 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.421 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.418 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.405 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.402 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.367 | N/A | N/A | f.15.1 | Small-conductance potassium channel |
| View | Download | 0.367 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.363 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.354 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.353 | N/A | N/A | d.79.1 | YjgF-like |
| View | Download | 0.352 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.351 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.347 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.324 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.318 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.318 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.317 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.313 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.313 | N/A | N/A | a.18.1 | T4 endonuclease V |
| View | Download | 0.310 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.309 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.306 | N/A | N/A | d.52.4 | YhbC-like, N-terminal domain |
| View | Download | 0.305 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.304 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.304 | N/A | N/A | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.295 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.294 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.292 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.286 | N/A | N/A | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.284 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.283 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.281 | N/A | N/A | a.69.3 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain |
| View | Download | 0.274 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.269 | N/A | N/A | c.47.1 | Thioredoxin-like |
| View | Download | 0.267 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.265 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.259 | N/A | N/A | a.46.1 | Methionine synthase domain |
| View | Download | 0.253 | N/A | N/A | c.23.1 | CheY-like |
| View | Download | 0.249 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.247 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.247 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.242 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.242 | N/A | N/A | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.242 | N/A | N/A | d.88.1 | SRF-like |
| View | Download | 0.239 | N/A | N/A | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.238 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.234 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.233 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.232 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.228 | N/A | N/A | e.37.1 | Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains |
| View | Download | 0.228 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.226 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.216 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.213 | N/A | N/A | a.112.1 | Description not found. |
| View | Download | 0.211 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.208 | N/A | N/A | a.150.1 | Anti-sigma factor AsiA |
| View | Download | 0.206 | N/A | N/A | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
| View | Download | 0.205 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
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Region A: Residues: [607-691] |
1 11 21 31 41 51
| | | | | |
1 NLLMKTKISD AEELVTSTEL KLEELKVDLN RKRYKLHQQV IHVIDITSKF KINIQSSLEN 60
61 SENELGNVIE ELRNLEFETE HNVTN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.851 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.784 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.696 | N/A | N/A | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.681 | N/A | N/A | c.47.2 | RNA 3'-terminal phosphate cyclase, RPTC, insert domain |
| View | Download | 0.661 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
