YRC Public Data Repository - Protein Structure Prediction

Protein:	FLX1
Organism:	Saccharomyces cerevisiae
Length:	311 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLX1.

Description	E-value	Query Range	Subject Range
ADT3_BOVIN - ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=1 SV=3	5.0E-77	[1..311]	[1..298]
ADT1_MOUSE - ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4	9.0E-77	[5..311]	[4..298]
gi\|90085585 - gi\|90085585\|dbj\|BAE91533.1\| unnamed protein product [Macaca fascicularis] SLC25A6 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6	2.0E-76	[1..311]	[1..298]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	2.0E-76	[5..311]	[4..298]
ADT1_RAT - ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3	2.0E-76	[5..311]	[4..298]
gi\|4115767, gi\|4... - gi\|4115767\|dbj\|BAA36513.1\| ADP/ATP translocase [Rana rugosa], gi\|4115765\|dbj\|BAA36512.1\| ADP/ATP tra...	2.0E-76	[7..311]	[6..298]

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Predicted Domain #1

Region A:
Residues: [1-115]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVDHQWTPLQ KEVISGLSAG SVTTLVVHPL DLLKVRLQLS ATSAQKAHYG PFMVIKEIIR  60
   61 SSANSGRSVT NELYRGLSIN LFGNAIAWGV YFGLYGVTKE LIYKSVAKPG ETQLK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	20.920819
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [116-220]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GVGNDHKMNS LIYLSAGASS GLMTAILTNP IWVIKTRIMS TSKGAQGAYT SMYNGVQQLL  60
   61 RTDGFQGLWK GLVPALFGVS QGALYFAVYD TLKQRKLRRK RENGL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	25.677781
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [221-311]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIHLTNLETI EITSLGKMVS VTLVYPFQLL KSNLQSFRAN EQKFRLFPLI KLIIANDGFV  60
   61 GLYKGLSANL VRAIPSTCIT FCVYENLKHR L

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	15.119186
Match:	PF00153
Description:	Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits