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View Structure Prediction Details

Protein: RPI1
Organism: Saccharomyces cerevisiae
Length: 407 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPI1.

Description E-value Query
Range
Subject
Range
gi|233044, gi|172480 - gi|233044|gb|AAB39843.1| 46-kDa negative regulator of the Ras-cyclic AMP pathway [Saccharomyces cere...
0.0 [1..407] [1..406]

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Predicted Domain #1
Region A:
Residues: [1-407]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLEYLQPKL NLMDESSTIS KNFPDYSPNL NTPITSNFNE ETGSDCSLVT PRIISSSNSN  60
   61 SNSNSNSNSN SNSGSIDENE LNNSNSSSSS ARQIRKKWKE PEDIAFITTI MNNSQLLTFV 120
  121 EYFKPMKNFW KKISKILFQQ YGYERNSRQC HDRFKVLYTK SLKVHPSKKS KQKKKKSKQE 180
  181 AGSNLNFDPS KLSRMQYLLV QLQNTFSFVN GNIILKSQKT LKPNKNGTND NINNHYYNNC 240
  241 NNNNNNINNS NNSNNNNSNN INRNSNHSTN VFSTPEHIQS SINLDKLESL PALDTKGEPS 300
  301 FISPAQFSLL SSAPADNLIL QTPPSPFFQQ TMPIQLPRDA QQEQISPVFS TDVIYMWQTM 360
  361 FNTIENLKEQ VNCLKNEVKQ LNHKFYQQNK PLHNMSTSDS ENFMQQH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle