YRC Public Data Repository - Protein Structure Prediction

Protein:	AIM19
Organism:	Saccharomyces cerevisiae
Length:	157 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM19.

Description	E-value	Query Range	Subject Range
gi\|49528950 - gi\|49528950\|emb\|CAG62612.1\| unnamed protein product [Candida glabrata] gi\|50294450, gi\|... - gi\|50294450\|ref\|XP_449636.1\| hypothetical protein CAGL0M06633g [Candida glabrata CBS138], gi\|4952895...	123.0	[0..10]	[157..5]
gi\|49643472, gi\|... - gi\|50308669\|ref\|XP_454337.1\| unnamed protein product [Kluyveromyces lactis], gi\|49643472\|emb\|CAG9942... gi\|49643472 - gi\|49643472\|emb\|CAG99424.1\| KLLA0E08603p [Kluyveromyces lactis]	112.0	[0..21]	[155..9]
gi\|44982431 - gi\|44982431\|gb\|AAS51717.1\| ADL203Cp [Ashbya gossypii ATCC 10895] gi\|44982431, gi\|... - gi\|45187670\|ref\|NP_983893.1\| ADL203Cp [Ashbya gossypii ATCC 10895], gi\|44982431\|gb\|AAS51717.1\| ADL20...	108.0	[0..19]	[156..6]
SPBC17A3.02 - conserved fungal protein AIM19_SCHPO - Altered inheritance of mitochondria protein 19 homolog OS=Schizosaccharomyces pombe (strain 972 / AT...	102.0	[0..82]	[152..49]
gi\|49652456 - gi\|49652456\|emb\|CAG84761.1\| DEHA2A10560p [Debaryomyces hansenii] gi\|50408565, gi\|... - gi\|50408565\|ref\|XP_456792.1\| hypothetical protein DEHA0A10934g [Debaryomyces hansenii CBS767], gi\|49...	87.0	[0..24]	[152..37]
gi\|49648405 - gi\|49648405\|emb\|CAG80725.1\| YALI0D07568p [Yarrowia lipolytica] gi\|49648405, gi\|... - gi\|50550129\|ref\|XP_502537.1\| YALI0D07568p [Yarrowia lipolytica], gi\|49648405\|emb\|CAG80725.1\| unnamed...	68.0	[0..24]	[152..17]
gi\|46432356, gi\|... - gi\|68490293\|ref\|XP_711037.1\| hypothetical protein CaO19.9410 [Candida albicans SC5314], gi\|68490202\|... orf19.1852, orf1... - orf19.1852 CGDID:CAL0001691 Assembly 19, Contig19-10133 (23189, 22665) CDS, reverse complemented, tr... gi\|238880095 - gi\|238880095\|gb\|EEQ43733.1\| conserved hypothetical protein [Candida albicans WO-1]	63.0	[0..5]	[152..21]

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Predicted Domain #1

Region A:
Residues: [1-157]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAKPATDDA KDELLSPFRR LYALTRTPYP ALANAALLAS TPVLSPSFKV PPTQSPALSI  60
   61 PMSRVFSKSS TARIGITTKT ALFFSTMQAI GAYMIYDNDL ENGAGFIATW SALYLIVGGK 120
  121 KSFSALRYGR TWPLVLSSVS LANAVLYGQR FLATGFQ

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits