| Protein: | SPO22 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 886 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPO22.
| Description | E-value | Query Range |
Subject Range |
|
|
0.01 | [351..596] | [83..324] |
|
Region A: Residues: [1-127] |
1 11 21 31 41 51
| | | | | |
1 MKAEKASDKY FNEVFCKCKI FATKLLSIHE ALFRTNTNLL RNFKCYISSF KSASEYRFDD 60
61 LITNTQQHSE KYLQIINENV ESFSNEEKTE FKKLTFEFYL VNFQLYLSEN DLDTANIYTA 120
121 KVNITDN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [128-131] |
1 11 21 31 41 51
| | | | | |
1 SKYM
|
|
Region B: Residues: [318-566] |
1 11 21 31 41 51
| | | | | |
1 FLITTQSKTM NDSEIAESLE NFSTQMERIV SEPLTKHAIS CIITLLWNTG KKLEKMEKYV 60
61 VSIRFYKLAL KDIISQNYSD RGKIQRALQV VYNKIEDYSN TVRVYQDMDE VDRQSPLCQL 120
121 LMLQSFLADD KTEEALTCLQ KIKSSEDEKS TDALILAVAE CKRKTDLSVQ GLLMIFDKLQ 180
181 SKSNSQTISS TSSSQTLSIL RYTLQMIVKV SEEEPLETFI NYLPTVQKLL QKAVEFLKTV 240
241 KLLNQLPPD
|
| Detection Method: | |
| Confidence: | 9.32 |
| Match: | 1n1bA |
| Description: | (+)-bornyl diphosphate synthase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [132-150] |
1 11 21 31 41 51
| | | | | |
1 DADLLIELCR MIYNSTVML
|
|
Region B: Residues: [164-172] |
1 11 21 31 41 51
| | | | | |
1 NIISFLKDV
|
|
Region C: Residues: [284-317] |
1 11 21 31 41 51
| | | | | |
1 MNTKFSIVCL DYLLINKLNS KNDSKFLGKA ICSR
|
| Detection Method: | |
| Confidence: | 9.32 |
| Match: | 1n1bA |
| Description: | (+)-bornyl diphosphate synthase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [151-163] |
1 11 21 31 41 51
| | | | | |
1 KEINNPETQL VDV
|
|
Region B: Residues: [173-283] |
1 11 21 31 41 51
| | | | | |
1 EKYLELPVEN LKSHTDYSNL KYSVLIFMAN CLVEGHPQAS ELEQCDHYLS LLQNEYPNKV 60
61 DPFILAINLT KRRNIVNPAE TIEEILMRMI MSVDVISNFQ AVIASINDLS K
|
| Detection Method: | |
| Confidence: | 9.32 |
| Match: | 1n1bA |
| Description: | (+)-bornyl diphosphate synthase |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [567-810] |
1 11 21 31 41 51
| | | | | |
1 VEKEAIYQQS VAVNEIEWFA SFSYNVAVKC LVDQSCESIS EFPQYCIQFI DLIPVQDFTF 60
61 PKMYHFTYWR FKATILQLII AKEKAKQDQH QKDWDIYEKS EELVNSINVM KKSSEFKDGS 120
121 SLEDRNTLHE CFLEALTIHL ESALMMPDQT RILDILKKTE LYQDSRVDAL LIDISSNMED 180
181 LPKGVLIEIL ETVLKRNMGP EVKERELCSW LRILLENAIN LNHEVELRIL DRVLKILNIN 240
241 QSSL
|
| Detection Method: | |
| Confidence: | 8.16 |
| Match: | 1hz4A |
| Description: | Transcription factor MalT domain III |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [811-886] |
1 11 21 31 41 51
| | | | | |
1 QDTDGVLQTE LETIATYCWN IGVNYIIKDN KSNGIVWCKH SMGFANMVNE GLQEQLYSLW 60
61 ESLASSANID INSIAK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.877 | 0.017 | meiosis | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
