| Protein: | SNL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 159 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNL1.
| Description | E-value | Query Range |
Subject Range |
|
|
8.0E-75 | [1..159] | [1..159] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MSHNAMEHWK SKLSKTSTST YVLLAVIAVV FLVTIRRPNG SKGKSSKKRA SKKNKKGKNQ 60
61 FEKAPV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 2.26936539964415 | bayes_pls_golite062009 |
| protein binding | 1.44233807327602 | bayes_pls_golite062009 |
|
Region A: Residues: [67-159] |
1 11 21 31 41 51
| | | | | |
1 PLTLEEQIDN VSLRYGNELE GRSKDLINRF DVEDEKDIYE RNYCNEMLLK LLIELDSIDL 60
61 INVDESLRRP LKEKRKGVIK EIQAMLKSLD SLK
|
| Detection Method: | |
| Confidence: | 29.481486 |
| Match: | PF02179 |
| Description: | BAG domain |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
