YRC Public Data Repository - Protein Structure Prediction

Protein:	YHR214W-A
Organism:	Saccharomyces cerevisiae
Length:	161 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR214W-A.

Description	E-value	Query Range	Subject Range
YAN8_YEAST - Uncharacterized protein YAR068W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YAR068W ... gi\|151941418, gi... - gi\|151941438\|gb\|EDN59803.1\| conserved protein [Saccharomyces cerevisiae YJM789], gi\|151941418\|gb\|EDN... gi\|190405989 - gi\|190405989\|gb\|EDV09256.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] YAR068W - Fungal-specific protein of unknown function; induced in respiratory-deficient cells	2.0E-31	[1..161]	[1..161]

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Predicted Domain #1

Region A:
Residues: [1-161]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQVQSWFPV QKQPTLAVTF TPLPQLSHAH LPLPPSHLVT KTDAMFQHQL LPTQLQPFPP  60
   61 NHTPLLLLLT VTTMAVTPRL SLLNVLKKLQ QPPFLQNHTL LLPLLTVTTT AVTPRLSLPR 120
  121 LPNKHHWPLA QSPSLLLQLL ILLLPAPSLV LSFNPKVWLL V

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Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits