| Protein: | DBP8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 431 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DBP8.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..417] | [180..597] |
|
|
0.0 | [1..419] | [275..694] |
|
|
0.0 | [1..393] | [179..580] |
|
|
0.0 | [1..416] | [178..602] |
|
|
0.0 | [1..412] | [206..618] |
|
Region A: Residues: [1-222] |
1 11 21 31 41 51
| | | | | |
1 MADFKSLGLS KWLTESLRAM KITQPTAIQK ACIPKILEGR DCIGGAKTGS GKTIAFAGPM 60
61 LTKWSEDPSG MFGVVLTPTR ELAMQIAEQF TALGSSMNIR VSVIVGGESI VQQALDLQRK 120
121 PHFIIATPGR LAHHIMSSGD DTVGGLMRAK YLVLDEADIL LTSTFADHLA TCISALPPKD 180
181 KRQTLLFTAT ITDQVKSLQN APVQKGKPPL FAYQVESVDN VA
|
| Detection Method: |  |
| Confidence: | 577.228787 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [223-431] |
1 11 21 31 41 51
| | | | | |
1 IPSTLKIEYI LVPEHVKEAY LYQLLTCEEY ENKTAIIFVN RTMTAEILRR TLKQLEVRVA 60
61 SLHSQMPQQE RTNSLHRFRA NAARILIATD VASRGLDIPT VELVVNYDIP SDPDVFIHRS 120
121 GRTARAGRIG DAISFVTQRD VSRIQAIEDR INKKMTETNK VHDTAVIRKA LTKVTKAKRE 180
181 SLMAMQKENF GERKRQQKKK QNDGKSLRS
|
| Detection Method: | |
| Confidence: | 577.228787 |
| Match: | 1hv8A_ |
| Description: | Putative DEAD box RNA helicase |
| Matching Structure (courtesy of the PDB): |
|
