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View Structure Prediction Details

Protein: PEX18
Organism: Saccharomyces cerevisiae
Length: 283 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX18.

Description E-value Query
Range
Subject
Range
PEX18_YEAST - Peroxisomal membrane protein PEX18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PEX18...
PEX18 - Peroxin required for targeting of peroxisomal matrix proteins containing PTS2; interacts with Pex7p;...
0.0 [1..283] [1..283]

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Predicted Domain #1
Region A:
Residues: [1-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSNRCQTNE VNKFISSTEK GPFTGRDNTL SFNKIGSRLN SPPILKDKIE LKFLQHSEDL  60
   61 NQSRSYVNIR PRTLEDQSYK FEAPNLNDNE TSWAKDFRYN FPKNVEPPIE NQIANLNINN 120
  121 GLRTSQTDFP LGFYSQKNFN IASFPVVDHQ IFKTTGLEHP INSHIDSLIN AEFSELEASS 180
  181 LEEDVHTEEE NSGTSLEDEE TAMKGLASDI IEFCDNNSAN KDVKERLNSS KFMGLMGSIS 240
  241 DGSIVLKKDN GTERNLQKHV GFCFQNSGNW AGLEFHDVED RIA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle