| Protein: | TDA11 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 504 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TDA11.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..504] | [1..504] |
|
|
1.0E-4 | [218..501] | [563..871] |
|
Region A: Residues: [1-172] |
1 11 21 31 41 51
| | | | | |
1 MNKFDEFIES NEKDLDVDTS TRNSIISMSP VRKTGRKIRS ASSNGYRLEH HRTSSAGSMH 60
61 SQRLMTPTRL NDQDHPLQAK PDARRVVTRH SSVSVPNAMS KRRSLIQPMV VPTTPESQNN 120
121 LPSVSHSEGS YGIPLESTTV LSSEQAMASG LRRSRNGSSQ SVNSMIATTI PT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [173-504] |
1 11 21 31 41 51
| | | | | |
1 NGVDVSALLQ SLATKELELL ECKQKIEDLK KQTQHEEQNY TRRARELHEL KEQVSKHLDP 60
61 SLNTPVKNRA FSPVYQNIPL ESRTENAGNS SLPSSVSKPK NMGHQSTNQS RSVSPQDIQE 120
121 RRQRDDSSDS SKQSLWSKPL ALFNQFDKII QHEIERTLNW DDSLSGTPEV QEGTPTSNSE 180
181 SSAQQYDNEA PGARQKSPSQ GSVSRSLWSF VSDVKAGLLG IEEENDNDVI TDNRCDPVYK 240
241 SDRQHEQKKS THKITNRGQA EDSGDDSSLN MRKFKTTTKF QKDNAGNNSL TDESGHRTRE 300
301 KKSKRSSNKL SFIGEPDNDN SSVKNSVEMT DF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
| Term | Confidence | Notes |
| binding | 0.905633128746365 | bayes_pls_golite062009 |
| protein binding | 0.618744687122036 | bayes_pls_golite062009 |
