| Protein: | MTC6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 526 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTC6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..526] | [1..526] |
|
Region A: Residues: [1-526] |
1 11 21 31 41 51
| | | | | |
1 MWILIYLFII WSSLRTWVTA VDSTTTVGDD LNETVSASVW PTMSPQMTVA FRSQRDVMGN 60
61 LTIDQLPYVG LNLRRVLLNN ETSMVNEGNN TRLLTLFKSM LSSEANAFVL DLEQYNNDLR 120
121 VVDTTLLFSD VLTALQSFIF STQNNLYANI IVLLLNISAP ELDSTEYRHQ NQTLNTTYIL 180
181 DKNLGNSFIY KPTDLQSDRA KNNTWNIYGK SSIDGWPTLG SVLYEQKKRL VIGELTDFFN 240
241 ETTAPYIFPH DVFHYEQGNS TLDCPSTVEG LTDLSSIHWR FLDSLFNSVD IKEYISCGLS 300
301 PIISNSAYVN NVTQLADIIH EGSVWSWDSD QPSVTQSTSK SGSSSGTLEA YNCVLLYYFA 360
361 NNETVTWRVG NCYNSNIGLC RYENMAFRWL VRSNKATYFD FDSYQGSKCP DQYSFNIPRS 420
421 PLEQRSFIAY MRNSSFSDTQ IWIDLNSISV SNCWVSGGPY ASCPYEKVIS RRNFVTMMVP 480
481 ASVCSFALLC IVVYLSVLRV PIYDNRKNWR RVINKISKSE LEGVPS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [289-526] |
1 11 21 31 41 51
| | | | | |
1 VDIKEYISCG LSPIISNSAY VNNVTQLADI IHEGSVWSWD SDQPSVTQST SKSGSSSGTL 60
61 EAYNCVLLYY FANNETVTWR VGNCYNSNIG LCRYENMAFR WLVRSNKATY FDFDSYQGSK 120
121 CPDQYSFNIP RSPLEQRSFI AYMRNSSFSD TQIWIDLNSI SVSNCWVSGG PYASCPYEKV 180
181 ISRRNFVTMM VPASVCSFAL LCIVVYLSVL RVPIYDNRKN WRRVINKISK SELEGVPS
|
| Detection Method: | |
| Confidence: | 2.05 |
| Match: | 1htnA |
| Description: | HUMAN TETRANECTIN, A TRIMERIC PLASMINOGEN BINDING PROTEIN WITH AN ALPHA-HELICAL COILED COIL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.327824947914988 | bayes_pls_golite062009 |
