| Protein: | PEX28 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 579 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PEX28.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..579] | [1..579] |
|
|
4.0E-59 | [346..533] | [74..231] |
|
|
0.001 | [173..318] | [533..668] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MSETSSSRRS ASKDAVKSYF AGKYNKVLDS ILEAEAAISK SPTVAEDLSG SSSSGNSEMS 60
61 HPSLTASSAT SQGISKKELL QQIAGSLFST SIERLKTAHS SEVSSTPEYS VNDSYGEQEC 120
121 RECDGVFKCS AHFEGAPEYY DDETESGPAL EPMTSNSEK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.336 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.422 | a.25.1 | Ferritin-like |
| View | Download | 0.326 | a.19.1 | Fertilization protein |
| View | Download | 0.422 | a.25.1 | Ferritin-like |
| View | Download | 0.395 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.395 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.336 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.333 | a.25.1 | Ferritin-like |
| View | Download | 0.326 | a.19.1 | Fertilization protein |
| View | Download | 0.283 | a.47.2 | t-snare proteins |
| View | Download | 0.222 | c.55.4 | Translational machinery components |
|
Region A: Residues: [160-336] |
1 11 21 31 41 51
| | | | | |
1 DPFIDVFLDK LISRLVPEKL PEREHFSSKT TIEHDLDTGR VPVFSATTLG SNFKKLSKKM 60
61 GSIFELQDSI VRLLTWRNPT GTVTSLILFT LICFNPMYLV ILPIFRFVYG IVVPGYVRKH 120
121 PLQRSIYPLK RNHGSSLLYD VCYEGKNEYS YGQQFFSKSF MDTLESRNQE IDEISEL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [337-579] |
1 11 21 31 41 51
| | | | | |
1 DKRTENTGEL KQGMKVLINL RDMQNMTSGT LHVIEAINSF LRKSSSFQNE ECSTKRFFTG 60
61 FLLIVFLKIL SPFVNWSYVC SIFAWCLLIY MHPRAHPKII SFFKTGTMGK EYKNLKKREH 120
121 QALNMIFDEQ PETKFIEIFE IYKKALLPND WKFFRYSNRI FDPQDPYRRA QQFPPGVDSL 180
181 ADVIPPTGWS FDPNFEWKID NDVDRWVVER GLNLPITGEF LFDPMFKRRR LIHRVIKNAT 240
241 PVA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
