| Protein: | CRP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 465 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRP1.
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-71 | [2..457] | [5..474] |
|
|
9.0E-64 | [2..457] | [5..483] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MSSELMFNYT FSWPAGPKDV ILTGTFDDWR GTLPLVKTAK GNFEITMPVK LANKDDTFQF 60
61 KFIVDGVWCV SDSYKKEHVS EGIENN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.969 | 0.000 | DNA binding | b.1.14 | Invasin/intimin cell-adhesion fragments |
|
Region A: Residues: [87-148] |
1 11 21 31 41 51
| | | | | |
1 FLQITDLVET QEVAGASRIP EAGGLLCGKP PRSAGPPSTS NRKKNKRNNK KRRSKLKKKS 60
61 TK
|
| Detection Method: | |
| Confidence: | 10.4 |
| Match: | 1deqA |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [149-465] |
1 11 21 31 41 51
| | | | | |
1 NNKKSNESLD DNEEEDGVTG TTTEDVTGTS REETPLAEPT NVSKEAPGNF HILPIDQSAD 60
61 TTQSNGIIGG PGPVLVPNPG EIKEFTEIRD VDARELNERL NKKEEVPEPV AGPIVESSVT 120
121 EKSPALPQAD DPIVETKEVA HNVQELTPQV EAVTPLINEP EPLPTPEAQI SIPESSKVEP 180
181 VEGSLQSKLV EKRESTEGVL DGSKKVENKA KKDEEVFTLD PIVNKAPKLP LTDEQTAEGR 240
241 KSPAVSEEKE KKKKQEKGSK EVKRSETSKE KKPSAKEVKK QTVKAPKKQT ASPLSSSTEE 300
301 PKKKKTGFFG KLKKLFK
|
| Detection Method: | |
| Confidence: | 13.66 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [313-465] |
1 11 21 31 41 51
| | | | | |
1 TPEAQISIPE SSKVEPVEGS LQSKLVEKRE STEGVLDGSK KVENKAKKDE EVFTLDPIVN 60
61 KAPKLPLTDE QTAEGRKSPA VSEEKEKKKK QEKGSKEVKR SETSKEKKPS AKEVKKQTVK 120
121 APKKQTASPL SSSTEEPKKK KTGFFGKLKK LFK
|
| Detection Method: | |
| Confidence: | 1.22 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
