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View Structure Prediction Details

Protein: CTM1
Organism: Saccharomyces cerevisiae
Length: 585 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CTM1.

Description E-value Query
Range
Subject
Range
CTM1 - Cytochrome c lysine methyltransferase, trimethylates residue 72 of apo-cytochrome c (Cyc1p) in the c...
CTM1_YEAST - Cytochrome c lysine N-methyltransferase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
0.0 [1..585] [1..585]

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Predicted Domain #1
Region A:
Residues: [1-585]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEVFRFYSN SRNIFIHKSL SLKPSTIDDP KSGYGLFVEP SKFKNDELKS ETIQLLRIPK  60
   61 RCTFNINTLL ALLGDEDEFS SKEEFQRTND KIKIALREIM AHPNFSVFLT ETNLLIIYFM 120
  121 IFQTIRSRYE IPENIQYYLE NVLMSIEVET AMDSIENLAT DYGHYPQIFG LRETLNLFKE 180
  181 LFHDVLNLSD IKHLYSAIIS RCLEIPERAD TKSEEFTVHS TLVPIVDFAN HEGTQKNAYF 240
  241 DIDPSNNDVL LLLDTKAVQS ELTKPIEVFI SYSPTEDLFS MLVTYGFTPD FRGNSQFWTV 300
  301 SFDRCFLRNY DGPDKTTNLR LFYKWMHINP VVPLVKYEHN GKTRWFLNDT TPEFDMLLLP 360
  361 FIPSIDDGKI ARWAYDSTCH LMFTKIHCLI NPEANEHALM IAENYRSLIK EKESNGDDFI 420
  421 NLPPLAWSLR YKDTENDCVR QRHICSEDAV AVLKQEEMQD STKTKSQFTS FFRKFLEFRR 480
  481 SKIIRPTSDS KVASILYQQE LEIIADLAKA IDSSSTIFFS DLNVTLDTEP ERLPPLRFLD 540
  541 DYIEISADKQ EPSPICEDLS YYTPSRFTDF FQEEVSQYAA FFQDD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
protein methyltransferase activity 4.97781355650779 bayes_pls_golite062009
histone methyltransferase activity 4.89128604457075 bayes_pls_golite062009
lysine N-methyltransferase activity 4.13829019654676 bayes_pls_golite062009
protein-lysine N-methyltransferase activity 4.13829019654676 bayes_pls_golite062009
histone-lysine N-methyltransferase activity 4.13829019654676 bayes_pls_golite062009
N-methyltransferase activity 2.87910762266807 bayes_pls_golite062009
histone methyltransferase activity (H3-K9 specific) 2.45015175643467 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 2.39062975446297 bayes_pls_golite062009
methyltransferase activity 2.04334127011119 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 1.97073056135916 bayes_pls_golite062009
transferase activity 1.26319468900595 bayes_pls_golite062009
protein binding 1.02960900993633 bayes_pls_golite062009
binding 1.00878369833728 bayes_pls_golite062009
nucleic acid binding 0.427423740181636 bayes_pls_golite062009
catalytic activity 0.414880787313138 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle