| Protein: | KIC1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1080 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KIC1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1080] | [1..1080] |
|
|
0.0 | [11..461] | [81..537] |
|
|
0.0 | [11..460] | [93..548] |
|
|
0.0 | [1..463] | [60..532] |
|
|
0.0 | [2..461] | [64..529] |
|
|
0.0 | [4..482] | [62..544] |
|
|
0.0 | [2..463] | [59..526] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MTTKPQNSKQ GLAEGEMDVS SLFKRTEVIG RGKFGVVYKG YNVKTGRVYA IKVLNLDSDS 60
61 DEVEDVQREI QFLASLKQIS NITRYYGSYL KDTSLWIIME H
|
| Detection Method: |  |
| Confidence: | 626.9794 |
| Match: | 1f3mC_ |
| Description: | pak1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [102-307] |
1 11 21 31 41 51
| | | | | |
1 CAGGSLRSLL RPGKIDEKYI GVIMRELLVA LKCIHKDNVI HRDIKAANVL ITNEGNVKLC 60
61 DFGVAAQVNQ TSLRRQTMAG TPYWMAPEVI MEGVYYDTKV DIWSLGITTY EIATGNPPYC 120
121 DVEALRAMQL IIKSKPPRLE DRSYSTSLKE FIALCLDEDP KERLSADDLL KSKFIRAHKA 180
181 TPTSILKELI SRYLLFRDKN KNKYKI
|
| Detection Method: | |
| Confidence: | 626.9794 |
| Match: | 1f3mC_ |
| Description: | pak1 |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [308-390] |
1 11 21 31 41 51
| | | | | |
1 EGSIPENEPS KPSEAPKPSQ NGGGDEAQKS IASNDNEIKR VNEGDVEMKW DFDSLSSSDY 60
61 IIENNINLDA LAEDNNEWAT AQH
|
| Detection Method: | |
| Confidence: | 20.154902 |
| Match: | 1cdmA_ |
| Description: | Calmodulin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [391-470] |
1 11 21 31 41 51
| | | | | |
1 DLFNYAYPDE DSYYFDPTSH NTRPFVYQGT TIGKGYPGTI AQNSTLNAPV TNNYTNSKYP 60
61 SKMVAGTTNT SGTHTAGPMT
|
| Detection Method: | |
| Confidence: | 20.154902 |
| Match: | 1cdmA_ |
| Description: | Calmodulin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [471-665] |
1 11 21 31 41 51
| | | | | |
1 SSKRLESKAP KQLLELFEDN EIITAENDVN TEAPKISKSI SSLNAGNSSR DDFIPSISNE 60
61 VNGNINNNKM RPHLPPLSSG NNYYSQSTPA LPLLQTKFNK TSKGPPTSGL TTAPTSIEIE 120
121 IPEELPNSAL PTPASADPVL IPSTKARSST VTAGTPSSSS SIQYKSPSNV PRRLTVSNNR 180
181 PEHCPSTITN QKLGS
|
| Detection Method: | |
| Confidence: | 11.62 |
| Match: | 1ei3A |
| Description: | Fibrinogen |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [666-671] |
1 11 21 31 41 51
| | | | | |
1 AVASNS
|
|
Region B: Residues: [896-972] |
1 11 21 31 41 51
| | | | | |
1 GKIKRSQSIS NRKNSSASEH PLNILGSSVS GNVSGIGNNN VGSNNNSGPN NSVPLSANTG 60
61 NTTIKANSTT IATSSSA
|
| Detection Method: | |
| Confidence: | 10.44 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [672-744] |
1 11 21 31 41 51
| | | | | |
1 GISSTPNNSN NYNNNTDSEN SRGSSGSNTA NSTQMGITNP GNVTKLSTHK ASSPSRPLFG 60
61 VGTSPNRKPA GSP
|
| Detection Method: | |
| Confidence: | 10.44 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [745-823] |
1 11 21 31 41 51
| | | | | |
1 TQNIGHNSTH TNLAPPPTMK PMANSKDNKD ILLQPLNSIP SSSTLNTISG NSSNNLTSSN 60
61 YFSNEKEGSR VNGDFKRNN
|
| Detection Method: | |
| Confidence: | 10.44 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [824-895] |
1 11 21 31 41 51
| | | | | |
1 PNLKLQMPLP TPVVRNKLLD PNTATSQNNN GMPGSAGIST NENINQFGFN TSSASNIPVS 60
61 MTPISEKHID FG
|
| Detection Method: | |
| Confidence: | 10.44 |
| Match: | 1l8mA |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [973-1080] |
1 11 21 31 41 51
| | | | | |
1 AASTTAPISQ QTIPSGTQFN HILSSAATAA NSVNSLGFGM CPPPQSLQME MFLDLESFLP 60
61 GKQRRVDRKP QVLKELENLL QMFEEGLPCI EHALKEQLIS TPIKDNEH
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.390 | a.118.1 | ARM repeat |
| View | Download | 0.629 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.398 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.469 | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.440 | e.20.1 | Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment |
| View | Download | 0.355 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.327 | a.118.1 | ARM repeat |
| View | Download | 0.327 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.325 | a.29.2 | Bromodomain |
| View | Download | 0.319 | a.59.1 | PAH2 domain |
| View | Download | 0.299 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.291 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.289 | a.24.4 | Hemerythrin |
| View | Download | 0.286 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.277 | d.58.11 | EF-G/eEF-2 domains III and V |
| View | Download | 0.276 | a.47.2 | t-snare proteins |
| View | Download | 0.270 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.269 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.267 | a.23.2 | Diol dehydratase, gamma subunit |
| View | Download | 0.255 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.250 | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.236 | d.108.1 | Acyl-CoA N-acyltransferases (Nat) |
| View | Download | 0.225 | a.24.3 | Cytochromes |
| View | Download | 0.217 | b.34.8 | Fumarylacetoacetate hydrolase, FAH, N-terminal domain |
| View | Download | 0.216 | a.118.8 | TPR-like |
| View | Download | 0.211 | d.52.2 | GMP synthetase C-terminal dimerisation domain |
| View | Download | 0.207 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.203 | c.47.1 | Thioredoxin-like |
