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View Structure Prediction Details

Protein: SAE3, YHR079BC
Organism: Saccharomyces cerevisiae
Length: 50 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SAE3, YHR079BC.

Description E-value Query
Range
Subject
Range
gi|190405860 - gi|190405860|gb|EDV09127.1| hypothetical protein SCRG_04792 [Saccharomyces cerevisiae RM11-1a]
SAE3 - Meiosis specific protein involved in DMC1-dependent meiotic recombination, forms heterodimer with Me...
SAE3_YEAST - Pachytene arrest protein SAE3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SAE3 PE=1 ...
56.0 [0..1] [37..1]

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Predicted Domain #1
Region A:
Residues: [1-50]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYLETQLNK KQKQIQEYES MNGNLIKMFE QLSKEKKKYV AIFSSRQKSV 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.737 a.144.2 Ribosomal protein L20
View Download 0.656 a.60.12 DNA polymerase beta-like, second domain
View Download 0.563 a.189.1 Description not found.
View Download 0.435 a.60.12 DNA polymerase beta-like, second domain
View Download 0.399 a.144.1 PABC (PABP) domain
View Download 0.399 a.144.1 PABC (PABP) domain
View Download 0.372 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.315 a.60.12 DNA polymerase beta-like, second domain


YRC Informatics Platform - Version 3.0
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