| Protein: | PTC7 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 374 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTC7.
| Description | E-value | Query Range |
Subject Range |
|
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3.0E-87 | [1..374] | [1..374] |
|
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7.0E-64 | [36..373] | [58..411] |
|
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7.0E-59 | [66..373] | [96..407] |
|
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1.0E-55 | [106..371] | [22..289] |
|
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2.0E-55 | [106..371] | [22..289] |
|
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2.0E-55 | [106..371] | [22..289] |
|
Region A: Residues: [1-82] |
1 11 21 31 41 51
| | | | | |
1 MFANVGFRTL RVSRGPLYGM FIVLFIGVLI AKFAGQMLID SETNFSHIIG SCSQIISFSK 60
61 RTFYSSAKSG YQSNNSHGDA YS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.691 | a.3.1 | Cytochrome c |
| View | Download | 0.633 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.589 | a.21.1 | HMG-box |
| View | Download | 0.584 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.400 | a.77.1 | DEATH domain |
| View | Download | 0.392 | a.24.3 | Cytochromes |
| View | Download | 0.383 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.357 | f.17.1 | F1F0 ATP synthase subunit C |
| View | Download | 0.357 | a.112.1 | Description not found. |
| View | Download | 0.321 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.315 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.313 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.311 | d.58.5 | GlnB-like |
| View | Download | 0.306 | a.4.12 | TrpR-like |
| View | Download | 0.304 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.278 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.273 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.273 | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.272 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.271 | a.74.1 | Cyclin-like |
| View | Download | 0.260 | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.242 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.242 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.238 | a.24.4 | Hemerythrin |
| View | Download | 0.229 | a.4.1 | Homeodomain-like |
| View | Download | 0.225 | a.74.1 | Cyclin-like |
| View | Download | 0.224 | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.223 | a.101.1 | Uteroglobin-like |
| View | Download | 0.220 | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.218 | a.21.1 | HMG-box |
| View | Download | 0.216 | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.214 | a.3.1 | Cytochrome c |
| View | Download | 0.214 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.211 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.210 | a.26.1 | 4-helical cytokines |
| View | Download | 0.209 | a.64.1 | Saposin |
| View | Download | 0.209 | a.39.1 | EF-hand |
| View | Download | 0.207 | a.51.1 | Cytochrome c oxidase subunit h |
| View | Download | 0.204 | a.74.1 | Cyclin-like |
|
Region A: Residues: [83-374] |
1 11 21 31 41 51
| | | | | |
1 SGSQSGPFTY KTAVAFQPKD RDDLIYQKLK DSIRSPTGED NYFVTSNNVH DIFAGVADGV 60
61 GGWAEHGYDS SAISRELCKK MDEISTALAE NSSKETLLTP KKIIGAAYAK IRDEKVVKVG 120
121 GTTAIVAHFP SNGKLEVANL GDSWCGVFRD SKLVFQTKFQ TVGFNAPYQL SIIPEEMLKE 180
181 AERRGSKYIL NTPRDADEYS FQLKKKDIII LATDGVTDNI ATDDIELFLK DNAARTNDEL 240
241 QLLSQKFVDN VVSLSKDPNY PSVFAQEISK LTGKNYSGGK EDDITVVVVR VD
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| Detection Method: | |
| Confidence: | 56.30103 |
| Match: | 1a6q__ |
| Description: | Protein serine/threonine phosphatase 2C, C-terminal domain; Protein serine/threonine phosphatase 2C, catalytic domain |
Matching Structure (courtesy of the PDB): |
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