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View Structure Prediction Details

Protein: VMA22
Organism: Saccharomyces cerevisiae
Length: 181 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VMA22.

Description E-value Query
Range
Subject
Range
VMA22_YEAST - Vacuolar ATPase assembly protein VMA22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=V...
gi|151944004 - gi|151944004|gb|EDN62297.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190405843 - gi|190405843|gb|EDV09110.1| vacuolar ATPase assembly protein VMA22 [Saccharomyces cerevisiae RM11-1a...
gi|207344703 - gi|207344703|gb|EDZ71760.1| YHR060Wp-like protein [Saccharomyces cerevisiae AWRI1631]
VMA22 - Peripheral membrane protein that is required for vacuolar H+-ATPase (V-ATPase) function, although no...
3.0E-92 [1..181] [1..181]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSETRMAQNM DTTDEQYLRL IELLSNYDST LEQLQKGFQD GYIQLSRSNY YNKDSLRGNY  60
   61 GEDYWDETYI GQLMATVEEK NSKVVVEIVK RKAQDKQEKK EEEDNKLTQR KKGTKPEKQK 120
  121 TQSHKLKQDY DPILMFGGVL SVPSSLRQSQ TSFKGCIPLI AQLINYKNEI LTLVETLSEQ 180
  181 E

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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