Protein: | MED6 |
Organism: | Saccharomyces cerevisiae |
Length: | 295 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED6.
Description | E-value | Query Range |
Subject Range |
|
253.0 | [0..4] | [295..3] |
|
253.0 | [0..5] | [262..12] |
|
229.0 | [0..1] | [295..1] |
|
218.0 | [0..1] | [295..1] |
|
211.0 | [0..6] | [217..11] |
|
204.0 | [0..9] | [229..13] |
|
203.0 | [0..9] | [204..13] |
|
203.0 | [0..9] | [204..13] |
|
203.0 | [0..9] | [204..13] |
|
203.0 | [0..9] | [204..13] |
Region A: Residues: [1-232] |
1 11 21 31 41 51 | | | | | | 1 MNVTPLDELQ WKSPEWIQVF GLRTENVLDY FAESPFFDKT SNNQVIKMQR QFSQLNDPNA 60 61 AVNMTQNIMT LPDGKNGNLE EEFAYVDPAR RQILFKYPMY MQLEEELMKL DGTEYVLSSV 120 121 REPDFWVIRK QRRTNNSGVG SAKGPEIIPL QDYYIIGANI YQSPTIFKIV QSRLMSTSYH 180 181 LNSTLESLYD LIEFQPSQGV HYKVPTDTST TATAATNGNN AGGGSNKSSV RP |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [233-295] |
1 11 21 31 41 51 | | | | | | 1 TGGANMATVP STTNVNMTVN TMGTGGQTID NGTGRTGNGN MGITTEMLDK LMVTSIRSTP 60 61 NYI |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.