| Protein: | AAP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 856 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AAP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..852] | [72..964] |
|
|
0.0 | [2..852] | [70..966] |
|
|
0.0 | [2..852] | [68..962] |
|
|
0.0 | [2..852] | [72..965] |
|
|
0.0 | [2..852] | [80..972] |
|
|
0.0 | [2..852] | [69..964] |
|
Region A: Residues: [1-205] |
1 11 21 31 41 51
| | | | | |
1 MSREVLPNNV TPLHYDITLE PNFRAFTFEG SLKIDLQIND HSINSVQINY LEIDFHSARI 60
61 EGVNAIEVNK NENQQKATLV FPNGTFENLG PSAKLEIIFS GILNDQMAGF YRAKYTDKVT 120
121 GETKYMATTQ MEATDARRAF PCFDEPNLKA TFAVTLVSES FLTHLSNMDV RNETIKEGKK 180
181 YTTFNTTPKM STYLVAFIVA DLRYV
|
| Detection Method: |  |
| Confidence: | 239.06601 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [206-298] |
1 11 21 31 41 51
| | | | | |
1 ESNNFRIPVR VYSTPGDEKF GQFAANLAAR TLRFFEDTFN IEYPLPKMDM VAVHEFSAGA 60
61 MENWGLVTYR VIDLLLDIEN SSLDRIQRVA EVI
|
| Detection Method: | |
| Confidence: | 239.06601 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [299-475] |
1 11 21 31 41 51
| | | | | |
1 QHELAHQWFG NLVTMDWWEG LWLNEGFATW MSWYSCNKFQ PEWKVWEQYV TDNLQRALNL 60
61 DSLRSSHPIE VPVNNADEIN QIFDAISYSK GSSLLRMISK WLGEETFIKG VSQYLNKFKY 120
121 GNAKTGDLWD ALADASGKDV CSVMNIWTKR VGFPVLSVKE HKNKITLTQH RYLSTGD
|
| Detection Method: | |
| Confidence: | 239.06601 |
| Match: | 1hs6A_ |
| Description: | Leukotriene A4 hydrolase C-terminal domain; Leukotriene A4 hydrolase N-terminal domain; Leukotriene A4 hydrolase catalytic domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [476-598] |
1 11 21 31 41 51
| | | | | |
1 VKEEEDTTIY PILLALKDST GIDNTLVLNE KSATFELKNE EFFKINGDQS GIFITSYSDE 60
61 RWAKLSKQAN LLSVEDRVGL VADAKALSAS GYTSTTNFLN LISNWKNEDS FVVWEQIINS 120
121 LSA
|
| Detection Method: | |
| Confidence: | 11.39 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [599-696] |
1 11 21 31 41 51
| | | | | |
1 LKSTWVFEPE DILNALDKFT LDLVLNKLSE LGWNIGEDDS FAIQRLKVTL FSAACTSGNE 60
61 KMQSIAVEMF EEYANGNKQA IPALFKAVVF NTVARLGG
|
| Detection Method: | |
| Confidence: | 11.39 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [697-856] |
1 11 21 31 41 51
| | | | | |
1 ENNYEKIFNI YQNPVSSEEK IIALRALGRF EDKELLERTL SYLLDGTVLN QDFYIPMQGI 60
61 RVHKKGIERL WAWMQEHWDE IAKRLQPGSP VLGGVLTLGL TNFTSFEALE KISAFYSRKV 120
121 TKGFDQTLAQ ALDTIRSKAQ WVSRDREIVA TYLREHEYDQ
|
| Detection Method: | |
| Confidence: | 11.39 |
| Match: | 1gw5B |
| Description: | Adaptin beta subunit N-terminal fragment |
| Matching Structure (courtesy of the PDB): |
|
