| Protein: | MYO1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1928 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MYO1.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..1178] | [1..1127] |
|
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0.0 | [2..1925] | [27..1937] |
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0.0 | [2..1924] | [29..1937] |
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0.0 | [2..1921] | [26..1933] |
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0.0 | [3..1180] | [6..1131] |
|
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0.0 | [238..1915] | [1..1689] |
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0.0 | [2..1925] | [27..1938] |
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0.0 | [7..1916] | [29..1936] |
|
Region A: Residues: [1-1171] |
1 11 21 31 41 51
| | | | | |
1 MTGGQSCSSN MIVWIPDEKE VFVKGELMST DINKNKFTGQ EEQIGIVHPL DSTEVSNLVQ 60
61 VRISDVFPVN PSTFDKVENM SELTHLNEPS VLYNLEKRYD CDLIYTYSGL FLVAINPYHN 120
121 LNLYSEDHIN LYHNKHNRLS KSRLDENSHE KLPPHIFAIA EEAYENLLSE GKDQSILVTG 180
181 ESGAGKTENT KKILQYLASI TSGSPSNIAP VSGSSIVESF EMKILQSNPI LESFGNAQTV 240
241 RNNNSSRFGK FIKIEFNEHG MINGAHIEWY LLEKSRIVHQ NSKERNYHIF YQLLSGLDDS 300
301 ELKNLRLKSR NVKDYKILSN SNQDIIPGIN DVENFKELLS ALNIIGFSKD QIRWIFQVVA 360
361 IILLIGNIEF VSDRAEQASF KNDVSAICSN LGVDEKDFQT AILRPRSKAG KEWVSQSKNS 420
421 QQAKFILNAL SRNLYERLFG YIVDMINKNL DHGSATLNYI GLLDIAGFEI FENNSFEQLC 480
481 INYTNEKLQQ FFNNHMFVLE QSEYLKENIQ WDYIDYGKDL QLTIDLIESK GPPTGVLPLL 540
541 DEEAVLPKST DESFYSKLIS TWDQNSSKFK RSRLKNGFIL KHYAGDVEYT VEGWLSKNKD 600
601 PLNDNLLSLL SSSQNDIISK LFQPEGEKSS SAGVEANISN QEVKKSARTS TFKTTSSRHR 660
661 EQQITLLNQL ASTHPHFVRC IIPNNVKKVK TFNRRLILDQ LRCNGVLEGI RLAREGYPNR 720
721 IAFQEFFQRY RILYPENSTT TTFSSKLKAS TKQNCEFLLT SLQLDTKVYK IGNTKLFFKA 780
781 GVLADLEKQK DVKLNNIMIK LTATIRGYTV RKEITYHLQK LKKTRVIGNT FRLYNRLVKE 840
841 DPWFNLFIRI KPLLTSSNDM TRTKKFNEQI NKLKNDLQEM ESKKKFLEEK NQKTVNELEN 900
901 TQDLLNQEKE NLRKNESLLN RVKTSSETLQ KQFDDLVSEK DEISREKLEV AQNLEEAHQK 960
961 IQGLQETIRE REATLEKLHS KNNELIKQIS DLNCDISKEQ SSQSLIKESK LKLENEIKRL1020
1021 KDVINSKEEE IKSFNDKLSS SEEDLDIKLV TLEKNCNIAM SRLQSLVTEN SDLRSKNENF1080
1081 KKEKAALNNQ LKNKESELLK MKEKIDNHKK ELATFSKQRD DAVSEHGKIT AELKETRIQL1140
1141 TEYKSNYQKI KEEYSNFQRE TKEQEQKKRN S
|
| Detection Method: |  |
| Confidence: | 1000.0 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [1172-1395] |
1 11 21 31 41 51
| | | | | |
1 LVESLNDSKI KELEARLSQE ISLNQYLNKR ISGNSVETNI SSTRRSTSYS DDPLDKEDII 60
61 KKYYDLQLAF TEITRNLENE IEEKKNLISR LRFTETRLAS SSFEDQKIKA QMKKLKKLIQ 120
121 DMDPSIPLDS ILNEPLDNCP DKESDINKLM LEVDYLKRQL DIETRAHYDA ENAISALHSK 180
181 FRKIQGESSL SSSDIYKLKF EASEERVKSL EDKLKTMPLR DRTN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [1396-1843] |
1 11 21 31 41 51
| | | | | |
1 LPVGDIIKNR DSISKYEEEI RYYKLENYKL QEILNESNGK LSQLTLDLRQ SKSKEALLSE 60
61 QLDRLQKDLE STERQKELLS STIKQQKQQF ENCMDDLQGN ELRLREHIHA LKQAEEDVKN 120
121 MASIIEKLKT QNKQKEKLIW EREMERNDSD MQLQETLLEL KRVQDVKKIL SDDLAHLKER 180
181 LSAVEDRSQY TDEINRLKEE LNCSLKAETN LKKEFATLKY KLETSTNDSE AKISDLLKQL 240
241 DHYTKVVEML NNEKDAISLA EKELYQKYEA LNTECESLKG KIVSLTKIKQ ELESDLNQKT 300
301 DALQISNAAL SSSTQKNKEI TEKIKYLEET LQLQMEQNSR NGELVKTLQA SCNGYKDKFD 360
361 DEKQKNIDLY EENQTLQKLN TDLQLQLKNL HERLSDTTEK NAWLSKIHEL ENMVSLETDL 420
421 KYEEMKKNKS LERAVEELQT KNSQQTDV
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| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1cii__ |
| Description: | Colicin Ia; Colicin Ia, N-terminal domain |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [1844-1928] |
1 11 21 31 41 51
| | | | | |
1 IELANKNRSE FEEATLKYEA QISDLEKYIS QQELEMKKSI RDNSSYRDKV QEMAQEIEFW 60
61 KSRYESTMIG SKNIDSNNAQ SKIFS
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| Detection Method: | |
| Confidence: | 8.0 |
| Match: | 1c1gA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
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