| Protein: | YSC83 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 385 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YSC83.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..385] | [1..385] |
|
|
0.0 | [1..385] | [1..385] |
|
Region A: Residues: [1-385] |
1 11 21 31 41 51
| | | | | |
1 MAWSGGKDIV DQIFDAGYWL VSKSAVLSDE IKNHVEKSIE SISGKISNKE TPRLQENDSN 60
61 RSKVYKTLRI GLQDHWKLGL GISATSLCLY LGYRTFFKLP PNLPEAESQV VLILGDMNDP 120
121 IIRNQVMDLY RRRFTVYICT ENADVYKKHE EDQDFIYYID PTCEKDFEGF FVDVPRLASI 180
181 LFMPRLSYHP SGVISCDSLE SEIHSSIFVY YQALLSIIPH LKRKTQLIMF NPSLTADLNL 240
241 VHHSTEIITS GIIDSLFKIF KEYQRLNVST IKLGILQIGS QPSNYKFLRM AGSDIHEALH 300
301 YPVYKMIMSA NGYKLRQLLS WLTTLGGYNS VYYCGRFSYL VSWPFASLIF NHHTRLSLKR 360
361 LRGRLAKVYS SIISFFCRSS SKSSK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.928 | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [93-385] |
1 11 21 31 41 51
| | | | | |
1 YRTFFKLPPN LPEAESQVVL ILGDMNDPII RNQVMDLYRR RFTVYICTEN ADVYKKHEED 60
61 QDFIYYIDPT CEKDFEGFFV DVPRLASILF MPRLSYHPSG VISCDSLESE IHSSIFVYYQ 120
121 ALLSIIPHLK RKTQLIMFNP SLTADLNLVH HSTEIITSGI IDSLFKIFKE YQRLNVSTIK 180
181 LGILQIGSQP SNYKFLRMAG SDIHEALHYP VYKMIMSANG YKLRQLLSWL TTLGGYNSVY 240
241 YCGRFSYLVS WPFASLIFNH HTRLSLKRLR GRLAKVYSSI ISFFCRSSSK SSK
|
| Detection Method: | |
| Confidence: | 3.33 |
| Match: | 2ntnA |
| Description: | No description for 2ntnA was found. |
