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View Structure Prediction Details

Protein: YHL042W
Organism: Saccharomyces cerevisiae
Length: 150 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHL042W.

Description E-value Query
Range
Subject
Range
COS1 - Protein of unknown function, member of the DUP380 subfamily of conserved, often subtelomerically-enc...
COS1_YEAST - Protein COS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=COS1 PE=1 SV=1
192.0 [0..2] [149..223]

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Predicted Domain #1
Region A:
Residues: [1-150]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQRFSQVAT VIFFVMSIRS PRNLGFFFTL ALFVVLVCSQ EWFSFEMNRS CSMKVEHRMQ  60
   61 FLSTIISEHQ KSDVNCWDQI AKKMNVYLFE QKVSGSDVFF LDGADCERFF ERNFLRYLPS 120
  121 RKSSHPDLPI AELLPYIRKA DIACAGKQLI 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 52.244125
Match: PF00674.9
Description: No description for PF00674.9 was found.

Shown below is our most confident prediction for this domain.
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Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle