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View Structure Prediction Details

Protein: YHL017W
Organism: Saccharomyces cerevisiae
Length: 532 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHL017W.

Description E-value Query
Range
Subject
Range
YHB7_YEAST - Uncharacterized membrane protein YHL071W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN...
YHL017W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein co-localizes wi...
0.0 [1..532] [1..532]
SPAC26H5.07c - seven transmembrane receptor-like protein
YEG7_SCHPO - Uncharacterized protein C26H5.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC26H5...
0.0 [7..484] [11..466]
CE30262 - status:Partially_confirmed UniProt:Q22938 protein_id:AAK39214.2
0.0 [70..526] [91..550]
gi|25406184, gi|... - pir||A96749 unknown protein T10D10.5 [imported] - Arabidopsis thaliana, gi|15218497|ref|NP_177392.1...
0.0 [6..493] [1..496]
TMEM87B - transmembrane protein 87B
0.0 [123..522] [146..537]
CG17660-PA - This gene is referred to in FlyBase by the symbol Dmel\CG17660 (CG17660, FBgn0031356). It is a prote...
gi|220951604, gi... - gi|220959862|gb|ACL92474.1| CG17660-PA [synthetic construct], gi|220951604|gb|ACL88345.1| CG17660-PA...
0.0 [91..522] [110..524]
gi|12848404 - gi|12848404|dbj|BAB27940.1| unnamed protein product [Mus musculus]
0.0 [123..522] [82..480]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRTWLLLTW LLLLCGVVQG NQESINQKYH DVCSGMYSKE DFNGKVDPYI SFTLEELSLA  60
   61 DEDDDGEGVS VAVFDFQDYE HIGVRLPNGE IQYICDDYAL DLGLCEDS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-463]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SEGQFIIQET AIDPFTSKEH KLTSQILTFT QQELGTNDKV YSINKTGYYC VTTSSFISSS  60
   61 SKFKATVNFR NAYGQLDASE AYKMPIYAFL AVAYAVCTLV YSWLCWKHRH ELLPLQRYIL 120
  121 VFCIFLTADT IFVWMYYIIE NQKGNSSVAL HVYMVFISIF SAGKMTFTLL LALLISLGYG 180
  181 IVYPKLDRTL LRRCQIFAIF TFAVCVAFLV QKYSQNSESL SNLILITAIP LVLCLFAFYY 240
  241 LTLSSMNKTM TYLREQNQVV KLNMYRKLII LCYISLFILF LGLLVSTFAY VGMDTVDMIE 300
  301 QYWKTEFLIT DTWPSFVYFL VFVIFAFFWR PTSTSYLLAC SHQLPTDMEN VSEFD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [464-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LDDINSLSDE ALPNREPRND YQEHDHNMDI DLASDFEEVP SVNANTNANN DVLFDVDYDR  60
   61 DAKNDRSTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle