| Protein: | DUR3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 735 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DUR3.
| Description | E-value | Query Range |
Subject Range |
|
|
619.0 | [0..1] | [735..1] |
|
|
508.0 | [0..13] | [644..25] |
|
|
504.0 | [0..13] | [644..25] |
|
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503.0 | [0..6] | [644..17] |
|
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503.0 | [0..13] | [644..25] |
|
|
502.0 | [0..13] | [644..25] |
|
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498.0 | [0..13] | [644..25] |
|
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498.0 | [0..13] | [644..25] |
|
|
498.0 | [0..13] | [644..25] |
|
Region A: Residues: [1-486] |
1 11 21 31 41 51
| | | | | |
1 MGEFKPPLPQ GAGYAIVLGL GAVFAGMMVL TTYLLKRYQK EIITAEEFTT AGRSVKTGLV 60
61 AAAVVSSWIW CSTLLTSSTK EYADGIFGGY AYAAGACFQI IAFAILAIKT KQMAPNAHTY 120
121 LELVRTRYGK IGHGCYLFYA IATNILVTSM LLTSGSAVFS DLTGMNTIAS CFLLPVGVVV 180
181 YTLFGGIKAT FLTDYMHTCV IIIIVLVFAF KVYATSDVLG SPGKVYDLVR EAAKRHPVDG 240
241 NYQGEYMTMT SKSAGILLII NLIGNFGTVF LDNGYWNKAI SASPAASLKA YAIGGLAWFA 300
301 VPSLISLTMG LACLAVETSP NFPTYPDPLT SFQANSGLVL PAAAIAIMGK GGAVASLLMI 360
361 FMAVTSAMSA ELIAVSSVFT YDIYREYIDP RASGKKLIYT SHVACIFFGL AMSGFSVGLY 420
421 YGGISMGYIY EMMGIIISSA VLPVVLTLCS KDMNLVAAVV SPILGTGLAI MSWLVCTKSL 480
481 YKELTV
|
| Detection Method: |  |
| Confidence: | 5.0 |
| Match: | PF00474 |
| Description: | Sodium:solute symporter family |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [487-577] |
1 11 21 31 41 51
| | | | | |
1 DTTFMDYPML TGNLVALLSP AIFIPILTYV FKPQNFDWEK MKDITRVDET AELVQADPDI 60
61 QLYDAEANDK EQEEETNSLV SDSEKNDVRV N
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.612 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.519 | N/A | N/A | a.8.9 | Description not found. |
| View | Download | 0.471 | N/A | N/A | a.8.4 | Description not found. |
| View | Download | 0.412 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.412 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.401 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.401 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.387 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.376 | N/A | N/A | d.42.1 | POZ domain |
| View | Download | 0.340 | N/A | N/A | d.42.1 | POZ domain |
|
Region A: Residues: [578-648] |
1 11 21 31 41 51
| | | | | |
1 NEKLIEPNLG VVISNAIFQE DDTQLQNELD EEQRELARGL KIAYFLCVFF ALAFLVVWPM 60
61 PMYGSKYIFS K
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.743 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.637 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.637 | N/A | N/A | a.2.18 | Description not found. |
| View | Download | 0.557 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.539 | N/A | N/A | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.515 | N/A | N/A | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.473 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
|
Region A: Residues: [649-735] |
1 11 21 31 41 51
| | | | | |
1 KFFTGWVVVM IIWLFFSAFA VCIYPLWEGR HGIYTTLRGL YWDLSGQTYK LREWQNSNPQ 60
61 DLHVVTSQIS ARAHRQSSHF GQVDEII
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.870 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.777 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.750 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.710 | a.60.8 | HRDC-like |
| View | Download | 0.692 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.692 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.625 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.613 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
